Evidence map›Paper›PMID 41278833›Full record

ArticlebioRxiv : the preprint server for biology2025

High dynamic range shortwave infrared (SWIR) imaging of mice with an InGaAs camera.

Amish Patel, Xingjian Zhong, Mallory Moffett, Yidan Sun, Allison M Dennis

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Amish PatelBoston University, Department of Biomedical Engineering, Boston, Massachusetts, USA.ORCID 0000-0002-3585-4431
Xingjian ZhongBoston University, Department of Biomedical Engineering, Boston, Massachusetts, USA.ORCID 0000-0002-9133-0018
Mallory MoffettNortheastern University, Department of Chemical Engineering Boston, Massachusetts, USA.ORCID 0009-0001-6623-9538
Yidan SunNortheastern University, Department of Chemical Engineering Boston, Massachusetts, USA.ORCID 0000-0002-9147-5735
Allison M DennisNortheastern University, Department of Chemical Engineering Boston, Massachusetts, USA.ORCID 0000-0001-5759-9905

Funding

Multiplexed Imaging in the Near Infrared with Indium Phosphide Quantum ShellsR01GM129437 · NIGMS · NORTHEASTERN UNIVERSITY · PI DENNIS, ALLISON MARIE · 2019 to 2022
$2.1M
In Vivo Mapping of Enzyme Activity using SWIR-emitting, Self-illuminating Quantum Dot SensorsR21EB032647 · NIBIB · NORTHEASTERN UNIVERSITY · PI DENNIS, ALLISON MARIE · 2022 to 2024
$439k
NIBIB NIH HHS R21 EB032647NIGMS NIH HHS R01 GM129437
6 · The paper itself

Abstract

Significance: While shortwave infrared (SWIR) imaging provides superior tissue penetration and reduced autofluorescence for preclinical applications, quantitative fluorescence analysis is hindered by the limited dynamic range of InGaAs cameras, forcing a focus on either bright or dim anatomical features. Aim: We develop a high dynamic range (HDR) imaging method specifically adapted for the high-noise characteristics of InGaAs detectors to enable quantitative fluorescence imaging across wide intensity ranges. We demonstrate that one-time camera calibration based on a series of images encompassing the range of radiance intensities enables all subsequent image processing. Approach: We modified classical HDR algorithms with exposure-time-dependent dark current subtraction, preprocessing to exclude saturated and noisy pixels before camera response function recovery, and dynamic weighting range adjustment to account for shrinking intensity ranges at longer exposures. HDR image processing effects on preclinical imaging outcomes were analyzed using indocyanine green and SWIR-emitting PbS/CdS quantum dots in mouse models. Results: HDR imaging achieved a 22 dB improvement in dynamic range over single exposures, enabling simultaneous quantification across more than three orders of magnitude of fluorophore concentration. Conclusions: This software-based HDR SWIR imaging approach eliminates exposure parameter optimization and enables comprehensive biodistribution analysis across all anatomical structures from a single acquisition sequence, significantly streamlining preclinical imaging workflows while preserving quantitative accuracy.

Indexed as

dynamic rangefluorescence imagingInGaAs cameraNIR-IIShortwave infrared

Identifiers

PMID41278833
PMCPMC12637647

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.