Evidence map›Paper›PMID 41278743›Full record

ArticlebioRxiv : the preprint server for biology2025

Comprehensive profiling of transcription factors for reprogramming human astrocytes to neuronal cells through endogenous CRISPR-based gene activation.

Samuel J Reisman, Dahlia Halabi, Samantha E Miller, Lingyun Song, Sara Geraghty, Nicholas Sangvai, Grayson Rice, Alexias Safi, Gregory E Crawford, Charles A Gersbach

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Samuel J ReismanDepartment of Cell Biology, Duke University, Durham, NC, USA.
Dahlia HalabiDepartment of Biomedical Engineering, Duke University, Durham, NC, USA.
Samantha E MillerDepartment of Biomedical Engineering, Duke University, Durham, NC, USA.
Lingyun SongCenter for Advanced Genomic Technologies, Duke University, Durham, NC, USA.
Sara GeraghtyCenter for Advanced Genomic Technologies, Duke University, Durham, NC, USA.
Nicholas SangvaiDepartment of Biology, Duke University, Durham, NC, USA.
Grayson RiceCenter for Advanced Genomic Technologies, Duke University, Durham, NC, USA.
Alexias SafiCenter for Advanced Genomic Technologies, Duke University, Durham, NC, USA.
Gregory E CrawfordCenter for Advanced Genomic Technologies, Duke University, Durham, NC, USA.
Charles A GersbachDepartment of Cell Biology, Duke University, Durham, NC, USA.ORCID 0000-0003-1478-4013

Funding

The Duke FUNCTION Center: Pioneering the comprehensive identification of combinatorial noncoding causes of diseaseRM1HG011123 · NHGRI · DUKE UNIVERSITY · PI GREGORY E CRAWFORD, Raluca Gordan · 2020 to 2026
$21.9M
High-Throughput Functional Annotation of Gene Regulatory Elements and Variants Critical to Complex Cellular PhenotypesUM1HG012053 · NHGRI · DUKE UNIVERSITY · PI GREGORY E CRAWFORD, Charles A. Gersbach · 2021 to 2026
$10.7M
University Training Program in Biomolecular & Tissue EngineeringT32GM008555 · NIGMS · DUKE UNIVERSITY · PI GERSBACH, CHARLES A. · 1994 to 2021
$8.1M
Beyond GWAS: High Throughput Functional Genomics & Epigenome Editing to Elucidate the Effects of Genetic Associations for SchizophreniaR01MH125236 · NIMH · DUKE UNIVERSITY · PI CRAWFORD, GREGORY E, GERSBACH, CHARLES A. · 2021 to 2025
$8.1M
NHGRI NIH HHS RM1 HG011123NHGRI NIH HHS UM1 HG012053NIGMS NIH HHS T32 GM008555NIMH NIH HHS R01 MH125236
6 · The paper itself

Abstract

Neuronal loss is a hallmark of neurodegeneration and brain injury. Direct reprogramming of astrocytes into neurons has emerged as a promising approach to restore lost neurons. Comprehensive mapping and characterization of candidate astrocyte-to-neuron reprogramming factors is an essential step to realizing the potential of this strategy. Here, we established a CRISPR activation (CRISPRa)-based approach for neuronal reprogramming of primary human astrocytes. We conducted high-throughput CRISPRa screens of all human genes encoding transcription factors (TFs) to identify novel and efficient reprogramming factors. scRNA-seq characterization of top hits revealed that single TFs reprogram primary human astrocytes into multiple neuronal subtypes with distinct cell type-specific gene signatures. We demonstrate that

Identifiers

PMID41278743
PMCPMC12632514

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.