Evidence map›Paper›PMID 41278401›Full record

ArticleJTO clinical and research reports2025

Machine Learning Models Using General and Tissue-Specific Feature Extractors for Accurate Subtyping of Biopsy Samples: Advancing Lung Cancer Diagnosis in Latin America.

Viviane Teixeira Loiola de Alencar, Felipe Navarro Balbino Alves, Guilherme de Souza Velozo, Luiz Edmundo Lopes Mizutani, Iusta Caminha, Gabriel Barbosa Silva, Vladmir Cláudio Cordeiro de Lima, Fábio Rocha Fernandes Távora

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Article in JTO clinical and research reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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8 authors.

Viviane Teixeira Loiola de AlencarResearch and Development Department, Oncodata, São José dos Campos, Brazil.
Felipe Navarro Balbino AlvesResearch and Development Department, Oncodata, São José dos Campos, Brazil.
Guilherme de Souza VelozoDigital Pathology Department, Argos Anatomia Patológica, Fortaleza, Brazil.
Luiz Edmundo Lopes MizutaniResearch and Development Department, Oncodata, São José dos Campos, Brazil.
Iusta CaminhaPathology Department, Federal University of Ceará, Fortaleza, Brazil.
Gabriel Barbosa SilvaPathology Department, Federal University of Ceará, Fortaleza, Brazil.
Vladmir Cláudio Cordeiro de LimaDepartment of Medical Oncology, A.C. Camargo Cancer Center, São Paulo, Brazil.
Fábio Rocha Fernandes TávoraResearch and Development Department, Oncodata, São José dos Campos, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Lung cancer is the leading cause of cancer-related deaths worldwide, with accurate histologic subtype classification critical for diagnosis and treatment planning. Diagnostic variability and resource disparities, particularly in underrepresented regions such as Latin America, pose substantial challenges. This study developed and evaluated novel artificial intelligence models trained on both global and Latin American pathology samples for subtype classification of hematoxylin and eosin (HE)-stained whole-slide images (WSIs). Methods: Two DinoV2-based feature extractors, LungDino and OncoDino, trained on large data sets for task-specific and general pathology applications, were developed. The training data set consisted of 1308 HE-stained WSIs, including 412 adenocarcinomas, 323 squamous cell carcinomas, 41 small cell carcinomas, and 532 benign tissue samples, sourced from The Cancer Genome Atlas and an in-house Latin American data set. A ResNet model trained on ImageNet served as the baseline. Models were evaluated on 79 Latin American WSIs using receiver operating characteristic curves, and heatmaps were generated for tumor localization. Results: The DinoV2-based models outperformed the ResNet baseline. LungDino achieved the highest overall performance, with area under the curves of 0.97 for adenocarcinoma and 0.96 for squamous cell carcinoma. OncoDino excelled in underrepresented categories, achieving an area under the curve of 0.99 for small cell carcinoma, demonstrating its generalizability. Both models generated interpretable heatmaps, with LungDino demonstrating precise tumor localization. In the subset of samples classified as poorly differentiated or undifferentiated in HE pathology reports, the DinoV2 models also maintained high classification performance. Conclusion: These findings underscore the effectiveness of task-specific and general feature extractors in delivering accurate, explainable results and address a gap in artificial intelligence-driven histopathology advancements, paving the way for future clinical applications.

Indexed as

Artificial intelligenceDeep learningDigital pathologyHistologic subtypingLung cancerMachine learning

Identifiers

PMID41278401
PMCPMC12629879

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.