Evidence map›Paper›PMID 41276656›Full record

ArticleCommunications biology2025

Transcriptome profiling of tumor-infiltrating lymphocyte-mediated cytotoxicity against patient-derived lung cancer organoids.

Ziwen Qin, Hongchang Zhang, Yanling Li, Jianyi Yang, Haozhen Liu, Zhuojue Guan, Qinghua Hou, Haocheng Du, Xiaoqiang Li, Xian Lin and 5 more

Abstract read
In one paragraph

Article in Communications biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Ziwen Qin *Department of Thoracic Surgery, Peking University Shenzhen Hospital, Shenzhen, China.ORCID http://orcid.org/0009-0005-2764-4628
Hongchang Zhang *College of Life Sciences, University of Chinese Academy of Sciences, Beijing, China.
Yanling LiCentral Laboratory of Peking University Shenzhen Hospital, Shenzhen, China.
Jianyi YangDepartment of Thoracic Surgery, Peking University Shenzhen Hospital, Shenzhen, China.
Haozhen LiuDepartment of Thoracic Surgery, Peking University Shenzhen Hospital, Shenzhen, China.
Zhuojue GuanCollege of Life Sciences, University of Chinese Academy of Sciences, Beijing, China.
Qinghua HouDepartment of Thoracic Surgery, Peking University Shenzhen Hospital, Shenzhen, China.
Haocheng DuDepartment of Sports Medicine and Rehabilitation, Peking University Shenzhen Hospital, Shenzhen, China.
Xiaoqiang LiDepartment of Thoracic Surgery, Peking University Shenzhen Hospital, Shenzhen, China.
Xian LinShenzhen Key Laboratory of Inflammatory and Immunology Diseases, Shenzhen, China.ORCID http://orcid.org/0000-0001-9043-2648
Qumiao XuCollege of Life Sciences, University of Chinese Academy of Sciences, Beijing, China.
Qiao LiDepartment of Surgery, University of Michigan Ann Arbor, Ann Arbor, Michigan, USA.
Junhui ChenIntervention and Cell Therapy Center, Peking University Shenzhen Hospital, Shenzhen, China. chenjhpush@126.com.ORCID http://orcid.org/0000-0002-7085-0022
Jixian LiuDepartment of Thoracic Surgery, Peking University Shenzhen Hospital, Shenzhen, China. Liujx0417@163.com.ORCID http://orcid.org/0000-0001-6184-6905
Chao ChenDepartment of Thoracic Surgery, Peking University Shenzhen Hospital, Shenzhen, China. 409985846@qq.com.ORCID http://orcid.org/0000-0003-0990-5239

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Non-small cell lung cancer (NSCLC) is a leading cause of cancer mortality, and therapies utilizing tumor-infiltrating lymphocytes (TILs) show significant promise. However, molecular signatures defining a productive TIL-mediated response remain poorly characterized. Here, we establish a patient-derived organoid and autologous TIL co-culture platform to show that expanded TILs mediate potent, specific cytotoxicity against NSCLC organoids. This functional response is associated with a crucial shift in T-cell states from proliferative towards effector memory phenotypes and involves activating key signaling networks, including the TNF and IL-17 pathways. Furthermore, T-cell receptor (TCR) analysis confirms the expansion process selectively enriches tumor-associated clonotypes, resulting in a more focused repertoire. This work delineates the transcriptional and clonal signatures of an effective anti-tumor immune response, providing a robust framework to guide next-generation personalized TIL therapies.

Indexed as

Carcinoma, Non-Small-Cell LungCytotoxicity, ImmunologicLung NeoplasmsLymphocytes, Tumor-InfiltratingOrganoidsCoculture TechniquesGene Expression ProfilingHumansTranscriptome

Identifiers

PMID41276656
PMCPMC12748891

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.