Evidence map›Paper›PMID 41275291›Full record

ArticleJournal of translational medicine2025

NSUN7-mediated m

Yubo Zhao, Mengyang Zhang, Jiachun Ma, Hongye Mu, Kaishu Li, Fengjin Li, Qian Peng, Ling Qi

Abstract read
In one paragraph

Article in Journal of translational medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yubo ZhaoInstitute of Digestive Disease, The Affiliated Qingyuan Hospital (Qingyuan People's Hospital), Guangzhou Medical University, Guang Dong, China.
Mengyang ZhangInstitute of Digestive Disease, The Affiliated Qingyuan Hospital (Qingyuan People's Hospital), Guangzhou Medical University, Guang Dong, China.
Jiachun MaInstitute of Digestive Disease, The Affiliated Qingyuan Hospital (Qingyuan People's Hospital), Guangzhou Medical University, Guang Dong, China.
Hongye MuInstitute of Digestive Disease, The Affiliated Qingyuan Hospital (Qingyuan People's Hospital), Guangzhou Medical University, Guang Dong, China.
Kaishu LiInstitute of Digestive Disease, The Affiliated Qingyuan Hospital (Qingyuan People's Hospital), Guangzhou Medical University, Guang Dong, China.
Fengjin LiInstitute of Digestive Disease, The Affiliated Qingyuan Hospital (Qingyuan People's Hospital), Guangzhou Medical University, Guang Dong, China.
Qian PengInstitute of Digestive Disease, The Affiliated Qingyuan Hospital (Qingyuan People's Hospital), Guangzhou Medical University, Guang Dong, China.
Ling QiInstitute of Digestive Disease, The Affiliated Qingyuan Hospital (Qingyuan People's Hospital), Guangzhou Medical University, Guang Dong, China. qiling1718@gzhmu.edu.cn.

Funding

Guangdong Basic and Applied Basic Research Foundation 2025A1515010072; 2024A1515220029Wu Jieping Medical Foundation 320.6750.2024-03-49
6 · The paper itself

Abstract

backgroundGlioblastoma (GBM), the most aggressive primary brain tumor, has a dismal prognosis largely due to therapy-resistant stem-like cells that drive recurrence. While N6-methyladenosine modifications in GBM are well-studied, the role of 5-methylcytosine (m5C) modifications specifically in circular RNAs (circRNAs) remains poorly understood.

methodsBioinformatic analysis, qRT-PCR and Western blot assays were used to investigate the expression of NSUN7, circNTRK2, YBX3, STK31, IKZF1 in GBM tissues and cell lines. m5C dot blot assays, m5C-bisulfite sequence assays, Sanger’s sequencing, RNA pull down and RIP assays, in vitro kinase assays, chromatin immunoprecipitation and luciferase reporter gene assays are used to clarify the interaction between factors above. Colony formation assays, sphere formation assays, and stemness marker (OCT4, DCLK1) analysis were utilized to assess the impact of the factors above on GBM stemness. Subcutaneous heterotopic and orthotopic xenograft are utilized to demonstrate the function of YBX3/circNTRK2/STK31/IKZF1 axis in GBM in vivo.

resultsNSUN7 and YBX3 are both upregulated in GBM tissues and cell lines. NSUN7 catalyzes m5C modification of circNTRK2. YBX3 decreasing circNTRK2 stability and function via binding m5C of circNTRK2. CircNTRK2 binds to and activates STK31, leading to phosphorylation of IKZF1 at S63, which decreases the O-GlcNAc levels and transcriptional activity of IKZF1, thereby promoting the stem cell characteristics of GBM cells.

conclusionsThis study unveils that NSUN7-mediated m5C modification of circNTRK2 fuels GBM stemness via circNTRK2-dependent STK31 activation, thus identifying potential biomarkers for targeted molecular therapy of GBM and providing novel therapeutic targets for GBM treatment.

Indexed as

Brain NeoplasmsGlioblastomaNeoplastic Stem CellsProtein Serine-Threonine KinasesRNA, CircularAnimalsCell Line, TumorGene Expression Regulation, NeoplasticHumansMice, NudeRNA MethylationProtein Serine-Threonine KinasesRNA, CircularGlioblastomaIKZF1m5CNSUN7Stem cell-like phenotypes

Identifiers

PMID41275291
PMCPMC12673788

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.