Evidence map›Paper›PMID 41275076›Full record

ArticleMolecular medicine (Cambridge, Mass.)2025

Dysregulated mitochondrial homeostasis and DNA repair in the progression from colon adenoma to cancer.

Natalie Danesova, Josef Horak, Anna Valickova, Adrian Gil-Korilis, Jorge Ergui-Arbizu, Richard Palek, Jan Bruha, Miroslav Levy, Pavel Skrobanek, Jan Kral and 6 more

Abstract read
In one paragraph

Article in Molecular medicine (Cambridge, Mass.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Natalie DanesovaDepartment of Molecular Biology of Cancer, Institute of Experimental Medicine of the Czech Academy of Sciences, Prague, Czech Republic.
Josef HorakDepartment of Molecular Biology of Cancer, Institute of Experimental Medicine of the Czech Academy of Sciences, Prague, Czech Republic.
Anna ValickovaDepartment of Molecular Biology of Cancer, Institute of Experimental Medicine of the Czech Academy of Sciences, Prague, Czech Republic.
Adrian Gil-KorilisDepartment of Molecular Biology of Cancer, Institute of Experimental Medicine of the Czech Academy of Sciences, Prague, Czech Republic.
Jorge Ergui-ArbizuDepartment of Molecular Biology of Cancer, Institute of Experimental Medicine of the Czech Academy of Sciences, Prague, Czech Republic.
Richard PalekDepartment of Surgery, Medical Faculty in Pilsen, Charles University, Pilsen, Czech Republic.
Jan BruhaDepartment of Surgery, Medical Faculty in Pilsen, Charles University, Pilsen, Czech Republic.
Miroslav LevyDepartment of Surgery, First Faculty of Medicine, Charles University and Thomayer Hospital, Prague, Czech Republic.
Pavel SkrobanekDepartment of Oncology, First Faculty of Medicine, Charles University and Thomayer Hospital, Prague, Czech Republic.
Jan KralDepartment of Internal Medicine, University Hospital Motol, Second Faculty of Medicine, Charles University, Prague, Czech Republic.
Jiri JungwirthInstitute of Physiology, First Faculty of Medicine, Charles University, Prague, Czech Republic.
Jiri NeuzilLaboratory of Molecular Therapy, Institute of Biotechnology, Czech Academy of Sciences, Prague-West, Czech Republic.
Veronika VymetalkovaDepartment of Molecular Biology of Cancer, Institute of Experimental Medicine of the Czech Academy of Sciences, Prague, Czech Republic.
Pavel VodickaDepartment of Molecular Biology of Cancer, Institute of Experimental Medicine of the Czech Academy of Sciences, Prague, Czech Republic.
Sona VodenkovaDepartment of Molecular Biology of Cancer, Institute of Experimental Medicine of the Czech Academy of Sciences, Prague, Czech Republic. sona.vodenkova@iem.cas.cz.ORCID 0000-0003-0315-5668
Kristyna TomasovaDepartment of Molecular Biology of Cancer, Institute of Experimental Medicine of the Czech Academy of Sciences, Prague, Czech Republic.

Funding

Agentura Pro Zdravotnický Výzkum České Republiky NU22J-03-00033Grantová Agentura České Republiky 21-04607XGrantová Agentura, Univerzita Karlova GA UK No. 540225the project National Institute for Cancer Research (Programme EXCELES, ID Project No.LX22NPO5102) - Funded by the European Union - Next Generation EU
6 · The paper itself

Abstract

backgroundWhile nuclear DNA (nDNA) damage and alterations in nDNA repair are known to play a role in colon cancer (CC), there is insufficient research investigating these processes in mitochondrial DNA (mtDNA).

methodsThis study investigates mtDNA changes in CC, focusing on mitochondrial DNA copy number (mtDNA-CN) variations, mtDNA damage, and the expression and mutation status of DNA repair genes. Three cohorts were analyzed: healthy controls, colon adenoma patients, and CC patients, divided into a pilot and a validation set.

resultsOur findings revealed that mtDNA-CN was elevated in colon adenomas compared to adenoma-adjacent mucosa (FDR = 0.04), healthy mucosa (FDR = 0.005), and tumor-adjacent mucosa (FDR = 0.005). Moreover, mtDNA-CN was elevated in adenoma-adjacent mucosa compared to healthy mucosa (FDR = 0.04). MtDNA damage was greater in tumor-adjacent mucosa compared to tumor tissue in both the pilot and validation sets (FDR = 0.031 and FDR = 2.06e-05, respectively). Additionally, we identified novel DNA repair genes associated with mtDNA damage, predominantly upregulated in adenoma and tumor tissues compared to healthy colon tissues.

conclusionsTo conclude, this study highlights the importance of mtDNA alterations in CC development and identifies potential mtDNA biomarkers.

Indexed as

AdenomaColonic NeoplasmsDNA, MitochondrialDNA RepairMitochondriaAdultAgedCase-Control StudiesDisease ProgressionDNA Copy Number VariationsDNA DamageFemaleHomeostasisHumansMaleMiddle AgedDNA, MitochondrialBiomarkersColon adenomasColorectal cancerMitochondriaMitochondrial DNA copy numberMitochondrial DNA damageMitochondrial DNA repair

Identifiers

PMID41275076
PMCPMC12751573

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.