ArticleArchives of virology2025
Characterization of a novel alphapartitivirus associated with Ceratobasidium sp. AG-A strain SR-LN-10, a causal agent of strawberry root rot.
Article in Archives of virology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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Abstract
A novel alphapartitivirus, tentatively named "Ceratobasidium alphapartitivirus 1" (CeAPV1), was identified in the phytopathogenic fungus Ceratobasidium anastomosis group (AG)-A strain SR-LN-10, which was isolated from diseased strawberry roots exhibiting typical symptom of root rot. The full genome of CeAPV1 consists of two linear double-stranded RNA (dsRNA) segments: dsRNA1 and dsRNA2. The larger segment, dsRNA1 (1891 bp), contains an open reading frame (ORF) predicted to encode a 578-amino-acid (aa) RNA-dependent RNA polymerase (RdRp). The smaller segment, dsRNA2 (1878 bp), contains an ORF encoding a 546-aa coat protein (CP). BLASTp analysis showed that the RdRp encoded by CeAPV1 had the highest sequence similarity (74.78% identity) to the RdRp of Leucocoprinus alphapartitivirus 1 (LeAPV1). The CP encoded by CeAPV1 showed the highest sequence similarity (44.24% identity) to the CP of Bondarzewia berkeleyi partitivirus 1 (BbPV1). Phylogenetic analysis revealed that CeAPV1 clustered together with mycoviruses belonging to the genus Alphapartitivirus within the family Partitiviridae. Taken together, this indicated that CeAPV1 is a novel alphapartitivirus. This is the first report of a full-genome sequence of a novel alphapartitivirus infecting AG-A.
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