Evidence map›Paper›PMID 41272109›Full record

ArticleScientific reports2025

Associations between TNF gene promoter variants (rs361525, rs1800629, rs1799964, rs1799724) and the clinical course of idiopathic inflammatory myopathies.

Agnieszka Padjas, Anna Mikołajczyk-Korona, Radosław Dziedzic, Sylwia Dziedzina, Marek Sanak, Stanisława Bazan-Socha, Jan G Bazan, Lech Zaręba, Mariusz Korkosz, Joanna Kosałka-Węgiel

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In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

10 authors.

Agnieszka PadjasDepartment of Internal Medicine, Faculty of Medicine, Jagiellonian University Medical College, Jakubowskiego 2, 30-688, Kraków, Poland.ORCID http://orcid.org/0000-0001-6492-6521
Anna Mikołajczyk-KoronaDepartment of Internal Medicine, Faculty of Medicine, Jagiellonian University Medical College, Jakubowskiego 2, 30-688, Kraków, Poland.ORCID http://orcid.org/0000-0001-7590-7318
Radosław DziedzicDoctoral School of Medical and Health Sciences, Jagiellonian University Medical College, św. Łazarza 16, 31-530, Kraków, Poland.ORCID http://orcid.org/0000-0003-0321-3557
Sylwia DziedzinaDepartment of Internal Medicine, Faculty of Medicine, Jagiellonian University Medical College, Jakubowskiego 2, 30-688, Kraków, Poland.ORCID http://orcid.org/0000-0002-7760-9864
Marek SanakDepartment of Internal Medicine, Faculty of Medicine, Jagiellonian University Medical College, Jakubowskiego 2, 30-688, Kraków, Poland.ORCID http://orcid.org/0000-0001-7635-8103
Stanisława Bazan-SochaDepartment of Internal Medicine, Faculty of Medicine, Jagiellonian University Medical College, Jakubowskiego 2, 30-688, Kraków, Poland.ORCID http://orcid.org/0000-0001-9634-0963
Jan G BazanFaculty of Exact and Technical Science, Institute of Computer Science, University of Rzeszów, Pigonia 1, 35-310, Rzeszów, Poland.ORCID http://orcid.org/0000-0002-9738-7007
Lech ZarębaFaculty of Exact and Technical Science, Institute of Computer Science, University of Rzeszów, Pigonia 1, 35-310, Rzeszów, Poland.ORCID http://orcid.org/0000-0002-2221-614X
Mariusz KorkoszDepartment of Rheumatology and Immunology, Jagiellonian University Medical College, Jakubowskiego 2, 30-688, Kraków, Poland.ORCID http://orcid.org/0000-0002-1749-9739
Joanna Kosałka-WęgielDepartment of Rheumatology and Immunology, Jagiellonian University Medical College, Jakubowskiego 2, 30-688, Kraków, Poland. joanna.kosalka@uj.edu.pl.ORCID http://orcid.org/0000-0003-1013-2253

Funding

Jagiellonian University Medical College N41/DBS/001277
6 · The paper itself

Abstract

Idiopathic inflammatory myopathies (IIM) are characterized by muscle weakness and immune-mediated muscle injury. Tumor necrosis factor (TNF) appears to be involved in the pathogenesis of IIM, especially regarding susceptibility to malignancy. Here, we analyzed associations between variants of the TNF gene promoter and the clinical course of the disease. We conducted a case-control study that analyzed selected variants of the TNF gene promoter (rs361525, rs1800629, rs1799964, rs1799724) in 56 stable IIM patients using commercially available TaqMan allelic discrimination assays with real-time PCR. Clinical and laboratory data were collected to evaluate associations between genotypes and disease manifestations. Control subjects (n = 38) matched for sex and without a medical history of connective tissue diseases were included for comparison. The variant rs1800629 was the only one associated with increased susceptibility to the disease (p = 0.010), with a higher frequency of the AG genotype in the IIM group compared to controls. The same genotype (rs1800629 AG) was also associated with interstitial lung disease (ILD) in the patients (p = 0.024). Furthermore, ILD was related to the rs1799964 TT genotype (p = 0.049), which was also more frequent in those with anti-Jo1 antibodies (p = 0.012). The CT variant rs1799724 was associated with skin manifestations, such as the Gottron sign (p = 0.030) and the shawl sign (p = 0.021). No significant relationship was documented for the promoter variant of the rs361525 TNF gene. Our study revealed associations of specific variants of the TNF gene promoter with susceptibility to IIM and clinical manifestations of the disease. Extensive observational studies are needed to verify our findings.

Indexed as

Genetic Predisposition to DiseaseMyositisPolymorphism, Single NucleotidePromoter Regions, GeneticTumor Necrosis Factor-alphaAdultAgedAllelesCase-Control StudiesFemaleGenetic Association StudiesGenotypeHumansMaleMiddle AgedTNF protein, humanTumor Necrosis Factor-alphaIdiopathic inflammatory myopathiesTNF geneTumor necrosis factor

Identifiers

PMID41272109
PMCPMC12639174

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.