Evidence map›Paper›PMID 41271731›Full record

ArticleNature communications2025

Epithelial-mesenchymal cell competition coordinates fate transitions across tissue compartments during lung development and fibrosis.

Kylie Klinkhammer, Rachel Warren, Joseph Knopp, Toan Nguyen, Stijn P De Langhe

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Kylie Klinkhammer *Department of Medicine, Division of Pulmonary and Critical Medicine, Mayo Clinic, Rochester, MN, USA.ORCID http://orcid.org/0000-0003-3325-3023
Rachel Warren *Department of Medicine, Division of Pulmonary and Critical Medicine, Mayo Clinic, Rochester, MN, USA. warren.rachel@mayo.edu.ORCID http://orcid.org/0000-0001-9438-2975
Joseph Knopp *Department of Medicine, Division of Pulmonary and Critical Medicine, Mayo Clinic, Rochester, MN, USA.
Toan NguyenDepartment of Medicine, Division of Pulmonary and Critical Medicine, Mayo Clinic, Rochester, MN, USA.
Stijn P De Langhe *Department of Medicine, Division of Pulmonary and Critical Medicine, Mayo Clinic, Rochester, MN, USA. delanghe.stijn@mayo.edu.ORCID http://orcid.org/0000-0003-3867-4572

Funding

Cell competition in pulmonary fibrosis and ARDSR35HL161169 · NHLBI · MAYO CLINIC ROCHESTER · PI Stijn Piet Johan De Langhe · 2022 to 2026
$4.7M
Interdisciplinary Training in Lung Physiology and Biomedical EngineeringT32HL105355 · NHLBI · MAYO CLINIC ROCHESTER · PI PRAKASH, Y. S., SIECK, GARY C. · 2012 to 2021
$3.9M
HL-Lung stem cells and their niches.R01HL132156 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI DE LANGHE, STIJN PIET JOHAN · 2016 to 2019
$2.0M
HL-Role of c-Myc in myofibroblast differentiation in pulmonary fibrosisR01HL126732 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI DE LANGHE, STIJN PIET JOHAN, RICHES, DAVID W. · 2015 to 2018
$1.8M
Epithelial stem cell hippo signaling in pulmonary fibrosisR01HL146461 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI DE LANGHE, STIJN PIET JOHAN · 2019 to 2021
$1.6M
NHLBI NIH HHS R01 HL126732NHLBI NIH HHS R01 HL132156NHLBI NIH HHS R01 HL146461NHLBI NIH HHS R35 HL161169NHLBI NIH HHS T32 HL105355U.S. Department of Health & Human Services | NIH | National Heart, Lung, and Blood Institute (NHLBI) HL105355U.S. Department of Health & Human Services | NIH | National Heart, Lung, and Blood Institute (NHLBI) HL161169, HL132156, HL146461
6 · The paper itself

Abstract

The coordination between epithelial progenitors and their mesenchymal niche is critical for organogenesis and repair, yet the mechanisms governing their competitive interactions remain unclear. Here, we reveal a paradigm of tissue-scale fitness sensing in the lung, where mesenchymal Yap levels antagonize epithelial Yap levels to dictate epithelial stem cell fate. We show that reduced fitness in alveolar fibroblasts (AF1s) via Yap/Taz or Myc deletion leads to their apoptotic elimination and a collapse of the alveolar stem cell niche. This niche collapse triggers a pathological competitive response from the epithelium, which undergoes aberrant bronchiolization that phenocopies human pulmonary fibrosis. Mechanistically, we uncovered a molecular switch that controls mesenchymal fate. During development and fibrosis resolution, Snail1/2 sequesters Yap/Taz to drive an adipogenic program, generating niche-supportive AF1s. Conversely, Yap/Taz-TEAD-Myc binding instructs a myogenic, pro-fibrotic program. Our findings demonstrate that inter-tissue cell competition, governed by a Snail/Yap rheostat, orchestrates lung architecture and provides a framework for targeting the mesenchymal niche to treat fibrotic disease.

Indexed as

Cell CompetitionEpithelial-Mesenchymal TransitionLungMesenchymal Stem CellsPulmonary FibrosisAdaptor Proteins, Signal TransducingAnimalsCell Cycle ProteinsCell DifferentiationFibroblastsHumansMiceMice, Inbred C57BLMice, KnockoutProto-Oncogene Proteins c-mycSnail Family Transcription FactorsAdaptor Proteins, Signal TransducingCell Cycle ProteinsMyc protein, mouseProto-Oncogene Proteins c-mycSnai1 protein, mouseSnail Family Transcription FactorsTrans-ActivatorsTranscription FactorsWwtr1 protein, mouseYap1 protein, mouseYAP-Signaling Proteins

Identifiers

PMID41271731
PMCPMC12685993

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.