Evidence map›Paper›PMID 41269397›Full record

ArticleAntonie van Leeuwenhoek2025

Seasonal variation in bacterial community composition in the brackish meromictic Lake Suigetsu.

Takafumi Kataoka, Yuki Sato-Takabe, Yunosuke Nakamura, Takuhei Shiozaki, Yuya Tsukamoto, Satoshi Hanada

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In one paragraph

Article in Antonie van Leeuwenhoek, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Takafumi KataokaDepartment of Marine Science and Technology, Fukui Prefectural University, Obama, Fukui, 917-0003, Japan. kataoka@fpu.ac.jp.ORCID http://orcid.org/0000-0002-9261-3490
Yuki Sato-TakabeDepartment of Biological Sciences, Tokyo Metropolitan University, 1-1 Minami-Osawa, Hachioji, Tokyo, 192-0397, Japan.
Yunosuke NakamuraDepartment of Biological Sciences, Tokyo Metropolitan University, 1-1 Minami-Osawa, Hachioji, Tokyo, 192-0397, Japan.
Takuhei ShiozakiAtmosphere and Ocean Research Institute, The University of Tokyo, 5-1-5 Kashiwano-Ha, Kashiwa, Chiba, 277-8564, Japan.
Yuya TsukamotoAtmosphere and Ocean Research Institute, The University of Tokyo, 5-1-5 Kashiwano-Ha, Kashiwa, Chiba, 277-8564, Japan.
Satoshi HanadaDepartment of Biological Sciences, Tokyo Metropolitan University, 1-1 Minami-Osawa, Hachioji, Tokyo, 192-0397, Japan.

Funding

Ministry of Education, Culture, Sports, Science and Technology 80635839
6 · The paper itself

Abstract

Lake Suigetsu, a deep meromictic lake connected to Wakasa Bay, receives freshwater inflow and exchange surface water with intruding seawater. To investigate bacterial community dynamics and substrate transport, we conducted seasonal 16S rRNA gene sequencing across three stratified layers (mixolimnion, chemocline, and monimolimnion) and two size fractions (0.2-0.8 µm for free-living; 0.8-3.0 µm for particle-attached). Community composition differed by depth, fraction, and season. Winter communities were dominated by Actinobacteria, Gammaproteobacteria, Alphaproteobacteria, and Bacteroidia, forming a potential "seed" community. In the monimolimnion, Bacteroidia, Chlorobia, and Cloacimonadia prevalent in free-living fraction, while Desulfobacterales and Desulfatiglandales and Anaerolineae were in particle-attached fraction. In autumn, a community shift toward Pseudomonadales and Enterobacteriales corresponded with lowered salinity and temperature in the chemocline, suggesting episodic entrainment driven by mixing of freshwater and monimolimnetic water. These findings highlight seasonal and vertical microbial dynamics and suggest that hydrological mixing may facilitate microbial connectivity between surface and deep waters.

Indexed as

BacteriaLakesMicrobiotaSeasonsDNA, BacterialPhylogenyRNA, Ribosomal, 16SSalinityDNA, BacterialRNA, Ribosomal, 16SBacterial community compositionLake SuigetsuMeromictic lakeSeasonal change

Identifiers

PMID41269397

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.