Evidence map›Paper›PMID 41266543›Full record

ArticleNPJ precision oncology2025

Integrative machine learning-driven prognosis and immunotherapy stratification via lactylation-associated gene in ovarian cancer.

Xiushen Li, Xuxiang Chen, Sailing Lin, Xiangyu Yang, Wenhao Wu, Xiaoyong Chen, Liqin Bao, Qiongfang Fang, Lijun Fan, Qi Zhang and 5 more

Abstract read
In one paragraph

Article in NPJ precision oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Xiushen Li *Department of Traditional Chinese Medicine, Jiangxi Maternal and Child Health Hospital, Nanchang Medical College, Nanchang, Jiangxi, China.
Xuxiang Chen *Department of Emergency, The Eighth Affiliated Hospital of Sun Yat-sen University, Shenzhen, 518060, Guangdong, China.
Sailing Lin *Shenzhen University Medical School, Shenzhen University, Shenzhen, Guangdong, China.
Xiangyu YangDepartment of Gastroenterology and Hepatology, The Second Affiliated Hospital of Chongqing Medical University, Yuzhong District, Chongqing, China.
Wenhao WuSchool of pharmacy, Shenzhen University Medical School, Shenzhen University, Shenzhen, 518055, Guangdong, China.
Xiaoyong ChenDepartment of Traditional Chinese Medicine, Jiangxi Maternal and Child Health Hospital, Nanchang Medical College, Nanchang, Jiangxi, China.
Liqin BaoSchool of Clinical Medicine, Jiangxi University of Traditional Chinese Medicine, Nanchang, Jiangxi, China.
Qiongfang FangShenzhen University Medical School, Shenzhen University, Shenzhen, Guangdong, China.
Lijun FanShenzhen University Medical School, Shenzhen University, Shenzhen, Guangdong, China.
Qi ZhangDepartment of Gynecology, Shenzhen University General Hospital, Shenzhen, Guangdong, China.
Jingxin MaDepartment of Gynecology, Shenzhen Nanshan People's Hospital, Shenzhen, Guangdong, China.
Guli ZhuDepartment of Gynecology, Shenzhen University General Hospital, Shenzhen, Guangdong, China.
Dequan YangDepartment of Emergency, The Eighth Affiliated Hospital of Sun Yat-sen University, Shenzhen, 518060, Guangdong, China. 13650472538@163.com.
Xueqing WuDepartment of Gynecology, Shenzhen University General Hospital, Shenzhen, Guangdong, China. wuxueqing0307@163.com.
Zhaorui ChengDepartment of Emergency, The Eighth Affiliated Hospital of Sun Yat-sen University, Shenzhen, 518060, Guangdong, China. czr168756179@163.com.

Funding

Jiangxi Provincial Administration of Traditional Chinese Medicine Project Fund 2024A0192Jiangxi Provincial Natural Science Foundation 20252BAC200566Key Programs of Basic and Applied Basic Research Fund of Guangdong Province 2022B1515120063Shenzhen Medical Research Fund D2402008Shenzhen Pea-cock Program-Project Development Fund 20210407618BShenzhen Science and Technology Innovation Committee JCYJ20210324100004013
6 · The paper itself

Abstract

This study utilized a comprehensive approach by integrating multi-omics data to systematically assess lactate modification levels across diverse cell types employing AUCell, JASMINE, and singscore algorithms. An epithelial subpopulation exhibiting the highest lactylation score was successfully pinpointed, and differentially expressed genes linked to lactylation were identified. Through machine learning techniques, a prognostic model was developed based on three genes (TMEM126B, PYGL, and NDUFS6). This model displayed significant associations with immune tumor microenvironment characteristics, microsatellite instability, immune checkpoint expression, and tumor mutation burden. Elevated lactylation risk was linked to the activation of cell cycle and oncogenic pathways, dampened anti-tumor immune responses, and increased expression of immune checkpoints, indicating potential limitations in immunotherapy efficacy. Noteworthy, NDUFS6 exhibited significant upregulation in ovarian cancer (OC) tissues and correlated with an unfavorable prognosis. Functional investigations demonstrated that NDUFS6 knockdown suppressed OC cell proliferation and induced cell cycle arrest. Remarkably, D-lactose emerged as a promising therapeutic agent targeting NDUFS6, underscoring its potential for precise OC treatment.

Identifiers

PMID41266543
PMCPMC12635173

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.