Evidence map›Paper›PMID 41266316›Full record

ArticleNature communications2025

Directed evolution of phages in biofilms enhances Pseudomonas aeruginosa control through improved lipopolysaccharide recognition.

Luciana Meneses, Lucie Valentová, Sílvio B Santos, Jelena Erdmann, Aurélie Crabbé, Pavel Plevka, Susanne Häussler, Diana P Pires, Tom Coenye, Joana Azeredo

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Intracellular barriers and receptor masking limit success of abioRxiv : the preprint server for biology · 2026
    Article
  5. Article
  6. Review
  7. Phage-Based Approaches to ChronicAntibiotics (Basel, Switzerland) · 2026
    Review
  8. A broad-host-range inhalable phage cocktail for treatment of multidrug-resistantFrontiers in cellular and infection microbiology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Luciana MenesesCEB - Centre of Biological Engineering, University of Minho, Braga, Portugal.ORCID http://orcid.org/0000-0001-9497-1200
Lucie ValentováCentral European Institute of Technology, Masaryk University, Brno, Czech Republic.ORCID http://orcid.org/0000-0003-0160-2014
Sílvio B SantosCEB - Centre of Biological Engineering, University of Minho, Braga, Portugal.ORCID http://orcid.org/0000-0003-0801-8080
Jelena ErdmannInstitute for Molecular Bacteriology, TWINCORE, Centre for Experimental and Clinical Infection Research, Hannover, Germany.
Aurélie CrabbéLaboratory of Pharmaceutical Microbiology, Ghent University, Gent, Belgium.ORCID http://orcid.org/0000-0003-3084-4418
Pavel PlevkaCentral European Institute of Technology, Masaryk University, Brno, Czech Republic.ORCID http://orcid.org/0000-0003-4215-3315
Susanne HäusslerInstitute for Molecular Bacteriology, TWINCORE, Centre for Experimental and Clinical Infection Research, Hannover, Germany.ORCID http://orcid.org/0000-0001-6141-9102
Diana P PiresCEB - Centre of Biological Engineering, University of Minho, Braga, Portugal. priscilapires@ceb.uminho.pt.ORCID http://orcid.org/0000-0003-2055-5743
Tom CoenyeLaboratory of Pharmaceutical Microbiology, Ghent University, Gent, Belgium.ORCID http://orcid.org/0000-0002-6407-0601
Joana AzeredoCEB - Centre of Biological Engineering, University of Minho, Braga, Portugal. jazeredo@deb.uminho.pt.ORCID http://orcid.org/0000-0002-5180-7133

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pseudomonas aeruginosa is a leading cause of chronic lung infections in cystic fibrosis (CF) patients. While bacteriophages hold potential as a treatment for antibiotic-resistant infections, the complex structure and heterogeneity of P. aeruginosa biofilms pose significant challenges to phage therapy. In this study, we investigate the adaptive evolution of the Pbunavirus phage PE1 to biofilms formed by a CF-derived P. aeruginosa isolate. Our findings reveal that biofilm-adapted PE1 mutants exhibit enhanced efficacy in controlling biofilms in vitro under conditions mimicking the CF lung environment. This improvement is attributed to the mutants' increased ability to recognize the diverse populations within the biofilm. Using a combination of cryo-EM, lipopolysaccharide (LPS) profiling, and adsorption assays, we demonstrate that mutations in tail fiber and baseplate genes of the phage improve adsorption and enable recognition of truncated LPS variants. This study highlights the critical role of biofilm heterogeneity in limiting phage effectiveness, identifies mechanisms to overcome this barrier, and pinpoints specific genomic targets for engineering phages tailored for therapeutic applications in CF patients.

Indexed as

BacteriophagesBiofilmsDirected Molecular EvolutionLipopolysaccharidesPseudomonas aeruginosaPseudomonas PhagesCryoelectron MicroscopyCystic FibrosisHumansMutationPhage TherapyPseudomonas InfectionsLipopolysaccharides

Identifiers

PMID41266316
PMCPMC12635225

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.