Evidence map›Paper›PMID 41264125›Full record

ArticleAmino acids2025

Aromatic amino acid-metal ion interactions: comparative effects of alkali and Zn

Sepideh Kalhor, Alireza Fattahi

Abstract readComparative Study
In one paragraph

Article in Amino acids, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Sepideh KalhorDepartment of Chemistry, Institute for Convergence Science and Technology, Bioinformatics Group, Sharif University of Technology, Tehran, Iran.
Alireza FattahiDepartment of Chemistry, Institute for Convergence Science and Technology, Bioinformatics Group, Sharif University of Technology, Tehran, Iran. fattahi@sharif.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Among the 20 standard amino acids, aromatic amino acids hold particular importance due to their crucial roles in protein-protein interactions. These residues, including phenylalanine, tyrosine, tryptophan, and histidine, contribute significantly to protein structure and function through their ability to engage in non-covalent interactions, such as π-π stacking and cation-π interactions. In addition, the acid-base duality of aromatic amino acids makes their interactions with metal ions particularly valuable. These interactions are implicated in several essential biological processes, including protein biosynthesis, enzyme catalysis, and molecular recognition. While the interactions between transition metal ions and amino acids have been extensively studied and well-documented, the role of alkali metal ions in similar contexts has received comparatively less attention. However, their influence on amino acid coordination and stability cannot be overlooked, especially given their biological relevance in processes such as ionic regulation, enzyme activation, and membrane transport. The results of this study demonstrate that the complexation of aromatic amino acids with alkali metal ions enhances their acidity. Additionally, we examined the detailed interactions of these metals with the aromatic amino acids.

Indexed as

Amino Acids, AromaticMetals, AlkaliCations, MonovalentAmino Acids, AromaticCations, MonovalentMetals, AlkaliAcidityAlkali metal ionsAromatic amino acidsDFTGas phasezinc ion (Zn²⁺) coordination

Identifiers

PMID41264125
PMCPMC12675642

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.