Evidence map›Paper›PMID 41262327›Full record

ArticleMolecular systems design & engineering2026

Exploring the temperature stability of CRISPR-Cas12b using molecular dynamics simulations.

Yinhao Jia, Katelynn Horvath, Santosh R Rananaware, Piyush K Jain, Janani Sampath

Abstract read
In one paragraph

Article in Molecular systems design & engineering, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Yinhao JiaDepartment of Chemical Engineering, University of Florida Gainesville FL USA jsampath@ufl.edu.
Katelynn HorvathDepartment of Chemical and Biomolecular Engineering, University of Connecticut Storrs CT USA.ORCID https://orcid.org/0009-0008-2673-202X
Santosh R RananawareDepartment of Chemical Engineering, University of Florida Gainesville FL USA jsampath@ufl.edu.
Piyush K JainDepartment of Chemical Engineering, University of Florida Gainesville FL USA jsampath@ufl.edu.ORCID https://orcid.org/0000-0001-7153-442X
Janani SampathDepartment of Chemical Engineering, University of Florida Gainesville FL USA jsampath@ufl.edu.ORCID https://orcid.org/0000-0001-6005-9096

Funding

Discovery and engineering of CRISPR/Cas systemsR35GM147788 · NIGMS · UNIVERSITY OF FLORIDA · PI Piyush K Jain · 2022 to 2026
$1.8M
NIGMS NIH HHS R35 GM147788
6 · The paper itself

Abstract

The thermal stability of CRISPR-Cas nucleases is a critical factor for their successful application in 'one-pot' diagnostic assays that utilize high-temperature isothermal amplification. To understand the atomistic mechanism of stabilization in a previously engineered variant of the thermostable BrCas12b protein, we performed all-atom molecular dynamics (MD) simulations on the wild-type and mutant forms of apo BrCas12b. High-temperature simulations reveal a small structural change along with greater flexibility in the PAM-interacting domain of the mutant BrCas12b, with marginal structural and flexibility changes in the other mutated domains. Comparative essential dynamics analysis between the wild-type and mutant BrCas12b at both ambient and elevated temperatures provides insights into the stabilizing effects of the mutations. Our findings offer comprehensive insights into the important protein motions induced by these mutations. These results provide insights into thermal stability mechanisms in BrCas12b that may inform the future design of CRISPR-based tools.

Identifiers

PMID41262327
PMCPMC12624333

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.