Evidence map›Paper›PMID 41261408›Full record

ArticleStem cell research & therapy2025

Unveiling the role of gastric cancer-associated mesenchymal stem cells and neutrophil extracellular traps through multi-omics analysis.

Zhengrui Li, Peng Luo, Zhaokai Zhou, Jijun Cao, Wen Zhang

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Article in Stem cell research & therapy, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Zhengrui Li *Shanghai Jiao Tong University School of Medicine, Shanghai, 200025, China.ORCID http://orcid.org/0000-0003-4923-0088
Peng Luo *Department of Oncology, Zhujiang Hospital, Southern Medical University, Guangzhou, 510280, Guangdong, China.
Zhaokai Zhou *Department of Urology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, 450052, Henan, China.
Jijun CaoDepartment of Laboratory Medicine, The First People's Hospital of Taicang (Taicang Hospital Affiliated to Soochow University), No. 58, Changsheng South Road, Taicang, Suzhou, 215400, Jiangsu, People's Republic of China. TCKS168168@163.com.
Wen ZhangDepartment of Laboratory Medicine, The First People's Hospital of Taicang (Taicang Hospital Affiliated to Soochow University), No. 58, Changsheng South Road, Taicang, Suzhou, 215400, Jiangsu, People's Republic of China. zw_890601@126.com.ORCID http://orcid.org/0009-0006-4234-4444

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGastric cancer (GC) is a highly aggressive malignancy with a poor prognosis, closely linked to the tumor microenvironment (TME). Emerging evidence highlights the critical role of gastric cancer-associated mesenchymal stem cells (GC-MSCs) in recruiting neutrophils and facilitating neutrophil extracellular traps (NETs) formation, thereby remodeling the tumor microenvironment (TME) and promoting tumor progression, immune modulation, and metastasis.

methodsThis study integrated single-cell RNA sequencing (scRNA-seq), Mendelian randomization (MR), and functional enrichment analyses to uncover the molecular underpinnings of GC. Transcriptomic data from public databases, including TCGA and GEO, were analyzed to explore cellular heterogeneity and the influence of NETs within the TME. MR analysis was conducted to establish causal relationships between key NET-related genes and GC. We integrated scRNA-seq, MR, and functional enrichment analyses to systematically dissect the roles of GC-MSCs and NETs in reshaping the tumor microenvironment.

resultsscRNA-seq identified 12 distinct cell types in the TME, with significantly elevated NET scores associated with GC-MSCs in the disease group. Functional enrichment analyses revealed that NET-associated marker genes were enriched in pathways such as oxidative phosphorylation and cytoplasmic translation. MR analysis confirmed EIF1 and RPS12 as key genes with causal links to GC progression, demonstrating robust associations with immune cell infiltration and critical signaling pathways. Additionally, transcriptional regulation analysis identified motifs and transcription factors governing these genes, while GSEA highlighted their involvement in pathways such as ribosome biogenesis and focal adhesion.

conclusionThis study elucidates the intricate interplay between GC-MSCs, NETs, and the immune microenvironment, offering novel insights into GC pathogenesis and potential therapeutic targets. EIF1 and RPS12 emerge as promising candidates for precision medicine, with broader implications for NET-related cancer research.

Indexed as

Extracellular TrapsMesenchymal Stem CellsNeutrophilsStomach NeoplasmsHumansMultiomicsSingle-Cell AnalysisTumor MicroenvironmentGastric cancerMendelian randomizationMesenchymal stem cellsNeutrophil extracellular trapsSingle-cell RNA sequencingTumor microenvironment

Identifiers

PMID41261408
PMCPMC12632061

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.