Evidence map›Paper›PMID 41260223›Full record

ArticleCell reports2025

Structural basis of DNA-dependent coactivator recruitment by the tuft cell master regulator POU2F3.

Aktan Alpsoy, Jonathan J Ipsaro, Damianos Skopelitis, Sujay Pal, Frank S Chung, Shannon Carpenter, John J Desmarais, Xiaoli S Wu, Kenneth Chang, Matthew T DiMare and 7 more

Abstract read
In one paragraph

Article in Cell reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Aktan AlpsoyCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Jonathan J IpsaroCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Howard Hughes Medical Institute, W.M. Keck Structural Biology Laboratory, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Damianos SkopelitisCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Sujay PalCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Frank S ChungTreeline Biosciences, Watertown, MA 02472, USA.
Shannon CarpenterTreeline Biosciences, Watertown, MA 02472, USA.
John J DesmaraisCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Xiaoli S WuCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Kenneth ChangCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Matthew T DiMareTreeline Biosciences, Watertown, MA 02472, USA.
Erin HartenTreeline Biosciences, Watertown, MA 02472, USA.
Staci BergmanTreeline Biosciences, Watertown, MA 02472, USA.
Justin B KinneyCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.
Jeffrey A EngelmanTreeline Biosciences, Watertown, MA 02472, USA.
Hyo-Eun C BhangTreeline Biosciences, Watertown, MA 02472, USA.
Leemor Joshua-TorCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA; Howard Hughes Medical Institute, W.M. Keck Structural Biology Laboratory, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA. Electronic address: leemor@cshl.edu.
Christopher R VakocCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA. Electronic address: vakoc@cshl.edu.

Funding

Single-Cell Biology Shared ResourceP30CA045508 · NCI · COLD SPRING HARBOR LABORATORY · PI David A Tuveson · 1987 to 2026
$118.9M
VIRAL TRANSACTIVATIONP01CA013106 · NCI · COLD SPRING HARBOR LABORATORY · PI William Richard McCombie · 1985 to 2026
$116.8M
A unified quantitative modeling strategy for multiplex assays of variant effectR01HG011787 · NHGRI · COLD SPRING HARBOR LABORATORY · PI JUSTIN B. KINNEY · 2022 to 2026
$4.1M
Biophysical modeling of cis-regulatory complexes in transcription and splicing using massively parallel reporter assaysR35GM133777 · NIGMS · COLD SPRING HARBOR LABORATORY · PI KINNEY, JUSTIN B. · 2019 to 2023
$2.4M
Exploiting POU2F3 addiction in the tuft cell variant of small cell lung cancerU01CA242919 · NCI · COLD SPRING HARBOR LABORATORY · PI VAKOC, CHRISTOPHER · 2019 to 2023
$2.2M
Biology and vulnerabilities of POU2F3+ tuft cell-like carcinomasR01CA290004 · NCI · COLD SPRING HARBOR LABORATORY · PI Christopher Vakoc · 2024 to 2026
$2.0M
Genetic technology development for elucidating lineage plasticity mechanisms in cancerR50CA305054 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI Damianos S. Skopelitis · 2025 to 2026
$359k
NCI NIH HHS P01 CA013106NCI NIH HHS P30 CA045508NCI NIH HHS R01 CA290004NCI NIH HHS R50 CA305054NCI NIH HHS U01 CA242919NHGRI NIH HHS R01 HG011787NIGMS NIH HHS R35 GM133777
6 · The paper itself

Abstract

The transcription factor POU2F3 defines the identity of tuft cells and underlies a distinct molecular subtype of small cell lung cancer (SCLC). Although POU2F3 is considered undruggable, its activity critically depends on the coactivators OCA-T1 and OCA-T2. Here, we demonstrate that acute suppression of either POU2F3 or OCA-T1 induces regression of tuft cell-like SCLC xenografts in vivo. To explore the structural basis and druggability of this dependency, we determine crystal structures of POU2F3 bound to OCA-T1 or OCA-T2 in complex with DNA, revealing a tripartite, DNA-dependent interface. We further employ deep mutational scanning to assess the functional impact of 4,218 missense variants in POU2F3 and OCA-T1, uncovering both mutation-sensitive hotspots and structurally constrained regions critical for tumor cell fitness. These findings define a transcriptional complex that integrates DNA recognition with coactivator recruitment and nominate POU2F3-OCA-T as a structurally tractable vulnerability in tuft cell-like carcinomas.

Indexed as

DNAAnimalsCell Line, TumorHumansLung NeoplasmsMiceModels, MolecularProtein BindingSmall Cell Lung CarcinomaTuft CellsDNACP: cancerCP: molecular biologydeep mutational scanningOCA-T1OCA-T2POU2AF2POU2AF3POU2F3small cell lung cancertuft cellX-ray crystallography

Identifiers

PMID41260223
PMCPMC12755459

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.