Evidence map›Paper›PMID 41256635›Full record

ArticlebioRxiv : the preprint server for biology2025

Contrasting mutation patterns in haploid and diploid cells from two yeast species.

Kevin Bao, Rutuja Gupte, Neil Braker, Nathaniel P Sharp

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Kevin BaoDepartment of Genetics, University of Wisconsin-Madison, 425-G Henry Mall, Madison WI 53706.ORCID 0000-0001-9389-1268
Rutuja GupteDepartment of Genetics, University of Wisconsin-Madison, 425-G Henry Mall, Madison WI 53706.ORCID 0009-0003-2787-6977
Neil BrakerDepartment of Genetics, University of Wisconsin-Madison, 425-G Henry Mall, Madison WI 53706.
Nathaniel P SharpDepartment of Genetics, University of Wisconsin-Madison, 425-G Henry Mall, Madison WI 53706.ORCID 0000-0001-6016-083X

Funding

UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI AMY TRENTHAM-DIETZ · 1985 to 2026
$142.6M
The evolutionary and genomic drivers of mutation spectraR35GM154954 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI Nathaniel Sharp · 2024 to 2026
$1.1M
NCI NIH HHS P30 CA014520NIGMS NIH HHS R35 GM154954
6 · The paper itself

Abstract

There is significant variation in the rate and spectrum of spontaneous mutations among taxa. How this variation is shaped by natural selection remains a subject of debate. The drift barrier hypothesis proposes that selection generally favors lower mutation rates due to the risk of deleterious mutations but acts less effectively against weak mutator alleles in smaller populations, allowing the mutation rate to increase due to genetic drift. Given this model, we propose that mutation rates may also be elevated in cell types that appear rarely in a population, where DNA replication and repair processes are subject to selection less often. We can begin to test this prediction in yeast species, some of which can be grown in either a haploid or diploid cell state. Existing data on the budding yeast

Identifiers

PMID41256635
PMCPMC12621929

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.