Evidence map›Paper›PMID 41255838›Full record

ArticleIranian journal of biotechnology2025

Mathematical Modeling and Thermodynamic Integration for Precision PCR Optimization.

Hadja Fatima Tbahriti, Aicha Zerrouki, Fatima Zohra Mahammi, Ali Boukadoum

Abstract read
In one paragraph

Article in Iranian journal of biotechnology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Hadja Fatima TbahritiHigher School of Biological Sciences of Oran, Oran, Algeria.
Aicha ZerroukiHigher School of Biological Sciences of Oran, Oran, Algeria.
Fatima Zohra MahammiHigher School of Biological Sciences of Oran, Oran, Algeria.
Ali BoukadoumHigher School of Biological Sciences of Oran, Oran, Algeria.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objectives: The objective of this study was to develop a predictive modeling framework for optimizing MgCl Materials and Methods: The study developed predictive models using multivariate Taylor series expansion and thermodynamic functions integrated with 120 PCR primers across various species. Ridge, Lasso, and Elastic Net multiple regression analyses were applied to fine-tune these models. Results: The models demonstrated excellent predictive capabilities, achieving an R Conclusion: The research provides a tight framework for optimizing PCR conditions and enhancing specificity and sensitivity in DNA amplification. More importantly, it is based on an approach that combines theoretical modeling with empirical validation, thus offering valuable insight into the advancement of PCR-based methodologies.

Indexed as

LogarithmMelting temperature (Tm)MgCl2OptimizationPolymerase chain reactionTaylor series expansionThermodynamics

Identifiers

PMID41255838
PMCPMC12620865

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.