Evidence map›Paper›PMID 41254521›Full record

ArticleBMC plant biology2025

The draft genome assembly and annotation of allotetraploid Festuca glaucescens.

Izabela Pawłowicz, Piotr Kopeć, Arkadiusz Kosmala

Abstract read
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Izabela PawłowiczPlant Physiology Team, Institute of Plant Genetics, Polish Academy of Sciences, Strzeszynska 34, Poznan, 60-479, Poland. ipaw@igr.poznan.pl.
Piotr KopećDepartment of Computational Biology, Faculty of Biology, Adam Mickiewicz University, Umultowska 89, Poznan, 61-614, Poland.
Arkadiusz KosmalaPlant Physiology Team, Institute of Plant Genetics, Polish Academy of Sciences, Strzeszynska 34, Poznan, 60-479, Poland.

Funding

Narodowe Centrum Nauki 2020/39/B/NZ9/02488
6 · The paper itself

Abstract

backgroundWe present the first long-read genome assembly and annotation for Festuca glaucescens, a member of a genus characterized by polyploidy, large genome sizes, and a high content of repetitive sequences. Fescues are important forage and turf grasses in temperate regions, valued for their resilience to abiotic stress. Though, the allotetraploid F. glaucescens is particularly notable for its drought tolerance, yet its genomic architecture has remained largely unexplored.

resultsThe haploid assembly spans 5.52 Gb, with > 98% gene space completeness as assessed by BUSCO. Repetitive elements comprise ~ 77% of the genome, dominated by Gypsy and Copia LTR retrotransposons. We predicted 72,385 protein-coding genes, the majority of which are supported by transcriptomic and homology-based evidence. While some contig-level fragmentation persists, the assembly successfully captures the gene-rich, repeat-dense landscape of this complex polyploid genome.

conclusionsThis is the first annotated reference genome for a Festuca species, offering a foundational resource for functional genomics, comparative studies, and forage grass improvement.

Indexed as

FestucaGenome, PlantMolecular Sequence AnnotationPolyploidyRetroelementsTetraploidyRetroelementsFestuca glaucescensForage grassesFunctional genomicsGene annotationGenome assemblyPolyploidyRepeatome

Identifiers

PMID41254521
PMCPMC12625059

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.