Evidence map›Paper›PMID 41253855›Full record

ArticleScientific data2025

A Custom Annotated Dataset for Segmentation of Pulmonary Veins, Arteries, and Airways.

Jian Liu, Zheng Zhang, Bing Niu, Shuai Kang, Juan Ren, Lei Wang, Kai Xu

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Jian Liu *School of Mechanical Engineering, Shanghai Jiao Tong University, Shanghai, 200240, China.
Zheng Zhang *Department of Radiology, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai, 200433, China.
Bing NiuShanghai Simple Touch Technology Co., Ltd., Shanghai, 201600, China.
Shuai KangShanghai Simple Touch Technology Co., Ltd., Shanghai, 201600, China.
Juan RenShanghai Simple Touch Technology Co., Ltd., Shanghai, 201600, China.
Lei WangDepartment of Oncology, Shanghai Pulmonary Hospital, School of Medicine, Tongji University, Shanghai, 200433, China. wangleixxxn@163.com.
Kai XuSchool of Mechanical Engineering, Shanghai Jiao Tong University, Shanghai, 200240, China. k.xu@sjtu.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accurate segmentation of pulmonary structures from computed tomography (CT) is critical for lung disease management, yet progress is hampered by a lack of large-scale, public datasets with comprehensive multi-structure annotations. To address this, we present the Airway and Pulmonary Vessel Structural Representation in CT (AirRC) dataset, comprising 254 CT scans from the LUNA16 dataset meticulously annotated with 3D masks for pulmonary veins, arteries, airway lumen, and airway wall. Technical validation was performed via 5-fold cross-validation using a custom MONAI-based deep learning pipeline. The model achieved high mean Dice Similarity Coefficients (DSC) for Pulmonary Veins (0.953), Pulmonary Arteries (0.950), and Airway Lumen (0.941), with strong performance on the challenging Airway Wall (0.866). A two-stage refinement strategy further improved small airway branch segmentation. External validation on public benchmarks (ATM'22, Parse2022, HiPas) confirmed the utility and generalizability of models trained on AirRC, establishing it as a robust resource for developing and evaluating advanced pulmonary segmentation algorithms.

Indexed as

LungPulmonary ArteryPulmonary VeinsAlgorithmsDeep LearningHumansTomography, X-Ray Computed

Identifiers

PMID41253855
PMCPMC12627526

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.