Evidence map›Paper›PMID 41250961›Full record

ArticleThe FEBS journal2026

Cellular Morphometric Analysis (CellMorph)-a comprehensive imaging-based tool for quantifying cellular phenotype heterogeneity and dynamics across biological processes.

Henrique Quaiato de Oliveira, Solon Andrades da Rosa, Luiza Cherobini Pereira, Laura Boose de Mendonça, Juliete Scholl, Fabrício Figueiró, Thais Cardoso Bitencourt, Davi Piovesan Echevarria, João Luiz Aldinucci Buzzo, Jessica Boschini D'Agostin and 7 more

Abstract read
In one paragraph

Article in The FEBS journal, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Henrique Quaiato de OliveiraInstituto de Biociências, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Solon Andrades da RosaPrograma de Pós-Graduação em Biologia Celular e Molecular, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Luiza Cherobini PereiraPrograma de Pós-Graduação em Biologia Celular e Molecular, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Laura Boose de MendonçaPrograma de Pós-Graduação em Biologia Celular e Molecular, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Juliete SchollDepartamento de Bioquímica, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Fabrício FigueiróDepartamento de Bioquímica, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Thais Cardoso BitencourtPrograma de Pós-Graduação em Biologia Celular e Molecular, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Davi Piovesan EchevarriaServiço de Pesquisa Experimental, Hospital de Clínicas de Porto Alegre, Brazil.
João Luiz Aldinucci BuzzoDepartamento de Biologia Celular, Laboratório de Células Inflamatórias e Neoplásicas (LCIN), Universidade Federal do Paraná, Brazil.
Jessica Boschini D'AgostinDepartamento de Biologia Celular, Laboratório de Células Inflamatórias e Neoplásicas (LCIN), Universidade Federal do Paraná, Brazil.
Danieli Rosane DallemoleCentro de Biotecnologia, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Carolina OliveiraDepartamento de Biologia Celular, Laboratório de Células Inflamatórias e Neoplásicas (LCIN), Universidade Federal do Paraná, Brazil.
Fernanda SimasDepartamento de Biologia Celular, Laboratório de Células Inflamatórias e Neoplásicas (LCIN), Universidade Federal do Paraná, Brazil.
Fernanda Saez-CalazansServiço de Pesquisa Experimental, Hospital de Clínicas de Porto Alegre, Brazil.
Débora Santos-SousaServiço de Pesquisa Experimental, Hospital de Clínicas de Porto Alegre, Brazil.
Guido LenzPrograma de Pós-Graduação em Biologia Celular e Molecular, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.
Eduardo C Filippi-ChielaPrograma de Pós-Graduação em Biologia Celular e Molecular, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.ORCID https://orcid.org/0000-0001-8192-3779

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico CNPq/MCTI/FNDCT N° 18/2021Fundação de Amparo à Pesquisa do Estado do Rio Grande do Sul EDITAL FAPERGS 07/2021 - PROGRAMA PESQUISADOR GAÚHospital de Clínicas de Porto Alegre 2020-0497
6 · The paper itself

Abstract

Understanding eukaryotic cell morphometry is fundamental to cell biology, as cells exhibit a broad range of sizes and shapes during processes such as senescence, cell death, mitosis, and migration. Dynamic changes in subcellular compartments and protein distribution also occur, impacting cytoplasmic and nuclear characteristics. Traditional measurement methods are often limited, highlighting the need for alternatives that comprehensively integrate data from both the cytosol and nuclei while tracking individual live cells over time. To address these limitations, we developed Cellular Morphometric Analysis (CellMorph), a novel tool designed to objectively assess multiple features of individual eukaryotic cells, including cell size, shape, cytosolic staining, and morphometry. CellMorph can analyze bright-field and fluorescent images, accommodating both nonstained cells and those expressing fluorescent reporters or chromogenic labels. We validated the tool using various cellular models and specific staining protocols that target fundamental processes such as apoptosis, autophagy, and senescence. CellMorph captures the intricate heterogeneity within cell populations by providing a multidimensional perspective on individual cellular features and their differential responses to various stresses. This capability to track phenotypic changes over time makes CellMorph particularly valuable for studying dynamic cellular responses. Detailed morphometric data are essential for investigating cellular behavior in pathogenic processes and responses to stressors, including therapies or environmental changes. By integrating multiple parameters, CellMorph represents a significant advancement in cell biology, offering researchers a powerful tool to explore the complexities of cellular morphometry effectively.

Indexed as

Image Processing, Computer-AssistedAnimalsApoptosisAutophagyCell NucleusCell SizeCellular SenescenceHumansPhenotypecell biology toolcell statecellular morphometryphenotypic dynamicsingle‐cell biology

Identifiers

PMID41250961
PMCPMC13370736

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.