Evidence map›Paper›PMID 41249498›Full record

ArticleNature ecology & evolution2025

Recurrent evolution of selfishness from an essential tRNA synthetase in Caenorhabditis tropicalis.

Polina Tikanova, James Julian Ross, Andreas Hagmüller, Florian Pühringer, Pinelopi Pliota, Daniel Krogull, Valeria Stefania, Manuel Hunold, Alevtina Koreshova, Anja Koller and 7 more

Abstract read
In one paragraph

Article in Nature ecology & evolution, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Global genomic diversity of the selfing nematodebioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Polina TikanovaInstitute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.ORCID http://orcid.org/0000-0002-9637-6592
James Julian RossInstitute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.ORCID http://orcid.org/0000-0002-4745-6609
Andreas HagmüllerInstitute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.
Florian PühringerInstitute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.
Pinelopi PliotaInstitute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.ORCID http://orcid.org/0000-0002-1406-5978
Daniel KrogullInstitute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.ORCID http://orcid.org/0000-0003-4535-7540
Valeria StefaniaInstitute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.
Manuel HunoldInstitute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.
Alevtina KoreshovaInstitute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.ORCID http://orcid.org/0000-0002-5661-8577
Anja KollerInstitute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.
Ivanna OstapchukInstitute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.
Jacqueline OkweriInstitute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.
Joseph GokcezadeInstitute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.
Peter DuchekInstitute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria.
Gang DongMax Perutz Labs, Vienna BioCenter, Medical University of Vienna, Vienna, Austria.ORCID http://orcid.org/0000-0001-9745-8103
Eyal Ben-DavidIllumina Artificial Intelligence Laboratory, Illumina, San Diego, CA, USA.
Alejandro BurgaInstitute of Molecular Biotechnology of the Austrian Academy of Sciences, Vienna BioCenter, Vienna, Austria. alejandro.burga@imba.oeaw.ac.at.ORCID http://orcid.org/0000-0002-0211-4357

Funding

Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung) P34880EC | EU Framework Programme for Research and Innovation H2020 | H2020 Priority Excellent Science | H2020 European Research Council (H2020 Excellent Science - European Research Council) ERC-2019-StG-851470
6 · The paper itself

Abstract

No genome on Earth is free of selfish genes. This reflects both their ability to subvert the laws of inheritance and their de novo emergence from host genes. Yet, despite their ubiquity and key role in driving innovation, the mechanisms responsible for their genesis remain largely unexplored. Here we report the discovery of three toxin-antidote elements in the nematode Caenorhabditis tropicalis. Toxin-antidote elements are selfish genes that increase their frequency in populations by poisoning non-carrier individuals. We find that all three novel toxins-klmt-1, pzl-1 and hyde-1-arose via gene duplication from fars-3, an essential subunit of the phenylalanyl tRNA synthetase. Their antidotes-KSS proteins-are rapidly evolving F-box proteins that degrade toxins via the SCF ubiquitin-ligase complex. Our phylogenetic and genomic analyses strongly suggest that the ancestor of all extant KSS antidotes fortuitously acquired affinity for FARS-3, much like 'self' proteins are targeted in autoimmune disease. This interaction neutralized the toxicity of future paralogues before it arose (presuppression), allowing otherwise deleterious mutant alleles to persist and ultimately evolve into selfish genes-consistent with the theory of constructive neutral evolution.

Indexed as

CaenorhabditisEvolution, MolecularPhenylalanine-tRNA LigaseAnimalsGene DuplicationPhylogenyPhenylalanine-tRNA Ligase

Identifiers

PMID41249498
PMCPMC12680543

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.