Evidence map›Paper›PMID 41248215›Full record

ArticlePloS one2025

Analysis of categorical data from biological experiments with logistic regression and CMH tests.

Rebecca J Androwski, Tatiana Popovitchenko, Anna J Smart, Sho Ogino, Guoqiang Wang, Mark Saba, Christopher Rongo, Monica Driscoll, Jason Roy

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Functional Analysis of Late-Onset Alzheimer's Disease Risk Genes inbioRxiv : the preprint server for biology · 2026
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Rebecca J Androwski *Department of Molecular Biology and Biochemistry, Nelson Biological Laboratories, Rutgers, The State University of New Jersey, Piscataway, New Jersey, United States of America.ORCID 0000-0002-1563-591X
Tatiana Popovitchenko *Department of Genetics, Waksman Institute, Rutgers, The State University of New Jersey, Piscataway, New Jersey, United States of America.ORCID 0000-0002-6600-4667
Anna J SmartDepartment of Genetics, Waksman Institute, Rutgers, The State University of New Jersey, Piscataway, New Jersey, United States of America.
Sho OginoDepartment of Genetics, Waksman Institute, Rutgers, The State University of New Jersey, Piscataway, New Jersey, United States of America.
Guoqiang WangDepartment of Molecular Biology and Biochemistry, Nelson Biological Laboratories, Rutgers, The State University of New Jersey, Piscataway, New Jersey, United States of America.
Mark SabaDepartment of Molecular Biology and Biochemistry, Nelson Biological Laboratories, Rutgers, The State University of New Jersey, Piscataway, New Jersey, United States of America.
Christopher RongoDepartment of Genetics, Waksman Institute, Rutgers, The State University of New Jersey, Piscataway, New Jersey, United States of America.
Monica DriscollDepartment of Molecular Biology and Biochemistry, Nelson Biological Laboratories, Rutgers, The State University of New Jersey, Piscataway, New Jersey, United States of America.
Jason RoyDepartment of Biostatistics and Epidemiology, Rutgers School of Public Health, Piscataway, New Jersey, United States of America.ORCID 0000-0001-5178-4210

Funding

NJ ACTS: A Platform for Translational Science in New JerseyUM1TR004789 · NCATS · RUTGERS BIOMEDICAL AND HEALTH SCIENCES · PI Reynold Alexander Panettieri · 2024 to 2026
$16.8M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
Defining Roles of Genetics and Age in Extrusion of Neurotoxic AggregatesR37AG056510 · NIA · RUTGERS, THE STATE UNIV OF N.J. · PI MONICA A. DRISCOLL · 2017 to 2026
$5.3M
Understanding the Exopher: A Novel Mechanism for Extrusion of Neurotoxic ContentsR01AG047101 · NIA · RUTGERS, THE STATE UNIV OF N.J. · PI DRISCOLL, MONICA A., GRANT, BARTH DEMIAN · 2013 to 2022
$4.2M
Genetics Analysis of Neuronal Hypoxic Stress ResistanceR01GM101972 · NIGMS · RUTGERS, THE STATE UNIV OF N.J. · PI RONGO, CHRISTOPHER G · 2012 to 2024
$4.1M
Molecular and Cell Biological Foundations of Proteostress-Induced Neuronal ExtrusionR01AG084206 · NIA · RUTGERS, THE STATE UNIV OF N.J. · PI MONICA A. DRISCOLL, Barth Demian Grant · 2023 to 2026
$2.4M
Training in Translating Neuroscience to TherapiesT32NS115700 · NINDS · RUTGERS BIOMEDICAL AND HEALTH SCIENCES · PI MOURADIAN, M. MARAL · 2021 to 2025
$1.4M
NCATS NIH HHS UM1 TR004789NIA NIH HHS R01 AG047101NIA NIH HHS R01 AG084206NIA NIH HHS R37 AG056510NIGMS NIH HHS R01 GM101972NIH HHS P40 OD010440NINDS NIH HHS T32 NS115700
6 · The paper itself

Abstract

The choice of appropriate statistical tests in experimental biology is critical for scientific rigor and can be challenging in the case of categorical data analysis. Using example datasets from Caenorhabditis elegans research, we conduct statistical analysis of (1) a rare cellular event involving the formation of a neuronal extrusion called an exopher and (2) a variable behavioral response across time. We employ the Cochran-Mantel-Haenszel (CMH) test and logistic regression for analysis. Recognizing there are potential accessibility issues using logistic regression, we provide step-by-step tutorials and example code. We emphasize that logistic regression can handle both simple and complex multivariable datasets; logistic regression can also provide more comprehensive insights into experimental outcomes when compared to simpler tests like CMH. By analyzing real biological examples and demonstrating their analysis with R code, we provide a practical guide for biologists to enhance the rigor and reproducibility of categorical data analysis in experimental studies.

Indexed as

BiologyData Interpretation, StatisticalLogistic ModelsAnimalsCaenorhabditis elegans

Identifiers

PMID41248215
PMCPMC12622779

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.