Evidence map›Paper›PMID 41246821›Full record

ArticleActa crystallographica. Section D, Structural biology2025

Polo-like kinase 1-inhibitor co-complex structures via the surface-entropy reduction approach and a DARPin-assisted approach.

Uwe Eberspaecher, Arndt A Schmitz, Gerhard Siemeister, Ulf Bömer, Tiago M Bandeiras, Pedro M Matias, Volker K Schulze, Roman C Hillig

Abstract read
In one paragraph

Article in Acta crystallographica. Section D, Structural biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Uwe EberspaecherResearch and Development, Pharmaceuticals, Bayer AG, Muellerstrasse 178, 13353 Berlin, Germany.
Arndt A SchmitzResearch and Development, Pharmaceuticals, Bayer AG, Muellerstrasse 178, 13353 Berlin, Germany.ORCID 0000-0002-7104-6191
Gerhard SiemeisterNuvisan ICB GmbH, Muellerstrasse 178, 13353 Berlin, Germany.ORCID 0000-0002-4712-0531
Ulf BömerNuvisan ICB GmbH, Muellerstrasse 178, 13353 Berlin, Germany.ORCID 0009-0004-7147-039X
Tiago M BandeirasiBET, Instituto de Biologia Experimental e Tecnológica, Apartado 12, 2781-901 Oeiras, Portugal.ORCID 0000-0001-6089-6089
Pedro M MatiasiBET, Instituto de Biologia Experimental e Tecnológica, Apartado 12, 2781-901 Oeiras, Portugal.ORCID 0000-0001-6170-451X
Volker K SchulzeResearch and Development, Pharmaceuticals, Bayer AG, Muellerstrasse 178, 13353 Berlin, Germany.ORCID 0000-0002-0158-1789
Roman C HilligNuvisan ICB GmbH, Muellerstrasse 178, 13353 Berlin, Germany.ORCID 0000-0001-6267-7250

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polo-like kinase 1 (PLK1) is a major regulator of cell division and has been pursued as a drug target for cancer therapy for a long time. Crystallization of the kinase domain has proven to be exceptionally challenging. Previously, we published a crystallization approach using a PLK1-specific designed ankyrin-repeat protein (DARPin) as a crystallization facilitator. Here, we report an alternative route: crystallization was successful after the introduction of a double mutation which reduced surface entropy and enabled the formation of a new crystal contact. This new PLK1 crystallization system was used to determine the first co-complex crystal structure of the Bayer thiazolidinone lead series, as well as crystal structures with representatives of two competitor inhibitor series. The molecular binding modes of these three inhibitors are analysed and discussed, and the surface-entropy reduction approach is compared with the surface modifications employed by us and others to enable the crystallization of PLK1.

Indexed as

Cell Cycle ProteinsProtein Kinase InhibitorsProtein Serine-Threonine KinasesProto-Oncogene ProteinsAnkyrin RepeatCrystallizationCrystallography, X-RayEntropyHumansModels, MolecularPolo-Like Kinase 1Protein BindingCell Cycle ProteinsPolo-Like Kinase 1Protein Kinase InhibitorsProtein Serine-Threonine KinasesProto-Oncogene ProteinscrystallizationkinasePLK1 small-molecule inhibitorSERsurface-entropy reduction

Identifiers

PMID41246821
PMCPMC12809504

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.