Evidence map›Paper›PMID 41244675›Full record

ArticleFrontiers in microbiology2025

Proton pump inhibitors and gut microbiota dysbiosis: insights into the pathogenesis of ulcerative colitis.

Feng Cao, Zhenxin Liu, Shuo Liu, Yanwei Liu, Yong Qi, Yunsheng Cheng, Yong Wang, Yanyan Xu

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Modulation of Oxidative Stress and Nuclear Factor-κB- Associated Inflammatory Signaling by Rabeprazole in Acetic Acid-Induced Colonic InjuryThe Turkish journal of gastroenterology : the official journal of Turkish Society of Gastroenterology · 2026
    Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Proton pump inhibitor exposure modulates functional and transcriptional responses inFrontiers in cellular and infection microbiology · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Feng CaoDepartment of General Surgery, Second Affiliated Hospital of Anhui Medical University, Hefei, Anhui, China.
Zhenxin LiuDepartment of General Surgery, Second Affiliated Hospital of Anhui Medical University, Hefei, Anhui, China.
Shuo LiuNingxia Medical University College of Traditional Chinese Medicine, Ningxia, China.
Yanwei LiuDepartment of General Surgery, Second Affiliated Hospital of Anhui Medical University, Hefei, Anhui, China.
Yong QiDepartment of General Surgery, Second Affiliated Hospital of Anhui Medical University, Hefei, Anhui, China.
Yunsheng ChengDepartment of General Surgery, Second Affiliated Hospital of Anhui Medical University, Hefei, Anhui, China.
Yong WangDepartment of General Surgery, Second Affiliated Hospital of Anhui Medical University, Hefei, Anhui, China.
Yanyan XuDepartment of General Surgery, Second Affiliated Hospital of Anhui Medical University, Hefei, Anhui, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Ulcerative colitis (UC) is a chronic, relapsing inflammatory bowel disease characterized by continuous mucosal inflammation of the colon and rectum. The global prevalence of UC has been rising steadily, and accumulating evidence suggests a potential association between proton pump inhibitor (PPIs) use and UC development. Nevertheless, the precise role of PPIs in the pathogenesis and clinical course of UC remains unclear. Methods: The C57BL/6J mice were administered saline, omeprazole (OME) and dextran sulfate sodium to establish control, PPIs-treated and UC models, respectively. The fecal samples were subjected to high-throughput sequencing of the V3-V4 hypervariable regions of the 16S rRNA gene. Taxonomic annotation was performed using Mothur software to evaluate microbial diversity and abundance. Principal coordinate analysis, linear discriminant analysis effect size, and functional enrichment analyses were also conducted. Results: Alpha and beta diversity analyses showed that the richness and diversity of the gut microbiota in the PPI and UC groups were significantly lower than those in the control group ( Conclusion: Long-term PPI exposure profoundly alters the gut microbiota, characterized by reduced microbial diversity and enrichment of pro-inflammatory taxa. These findings highlight the contribution of PPIs to gut microbiota dysbiosis and UC pathogenesis, emphasizing the need for further research on microbiota-immunity interactions and for the development of targeted strategies to mitigate PPI-related adverse effects.

Indexed as

gut inflammationgut microbiota dysbiosisomeprazoleproton pump inhibitorsulcerative colitis

Identifiers

PMID41244675
PMCPMC12612687

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.