Evidence map›Paper›PMID 41244674›Full record

ArticleFrontiers in microbiology2025

Multiplex PCR-based rapid pathogen identification in acute cholecystitis using the FilmArray BCID2 panel.

Gaku Nakamura, Koji Asai, Ryutaro Watanabe, Makoto Kuroda, Yu Shibahara, Shintaro Teraoka, Osahiko Hagiwara, Nanako Kakizaki, Jiro Sato, Manabu Watanabe and 1 more

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Gaku NakamuraDepartment of Surgery, Toho University Ohashi Medical Center, Tokyo, Japan.
Koji AsaiDepartment of Surgery, Toho University Ohashi Medical Center, Tokyo, Japan.
Ryutaro WatanabeDepartment of Surgery, Toho University Ohashi Medical Center, Tokyo, Japan.
Makoto KurodaDepartment of Medical Laboratory Science, Faculty of Health Science, Kumamoto Health Science University, Kumamoto, Japan.
Yu ShibaharaDepartment of Surgery, Toho University Ohashi Medical Center, Tokyo, Japan.
Shintaro TeraokaDepartment of Surgery, Toho University Ohashi Medical Center, Tokyo, Japan.
Osahiko HagiwaraDepartment of Surgery, Toho University Ohashi Medical Center, Tokyo, Japan.
Nanako KakizakiDepartment of Surgery, Toho University Ohashi Medical Center, Tokyo, Japan.
Jiro SatoDepartment of Surgery, Toho University Ohashi Medical Center, Tokyo, Japan.
Manabu WatanabeDepartment of Surgery, Toho University Ohashi Medical Center, Tokyo, Japan.
Yoshihisa SaidaDepartment of Surgery, Toho University Ohashi Medical Center, Tokyo, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: Acute biliary infections are serious conditions in which delayed or inappropriate therapy can worsen clinical outcomes and promote antimicrobial resistance. This study evaluated the FilmArray® Blood Culture Identification 2 (BCID2) panel, a multiplex PCR system, for the rapid detection of pathogens in bile samples from patients with acute cholecystitis. Methods: Bile samples were collected intraoperatively or by percutaneous aspiration from 77 consecutive patients with acute cholecystitis. Each specimen was divided for conventional culture and BCID2 panel testing. Culture results served as the reference standard to calculate positive and negative percent agreement (PPA and NPA), predictive values, and accuracy. Results: Bacterial growth was observed in 34 cases (44.2%), yielding 57 isolates from 16 species. The BCID2 panel correctly detected 41 of 46 BCID2-targetable isolates. For detecting at least one pathogen, PPA (sensitivity) was 82.4%, NPA (specificity) 100%, positive predictive value 100%, negative predictive value 91.5%, and overall accuracy 92.2%. Detection was achieved in 70.6% of monomicrobial and 94.1% of polymicrobial infections, with higher bacterial loads (>10 Conclusion: Multiplex PCR testing using BCID2 panel enables rapid and accurate identification of causative bacteria directly from bile. This approach may support earlier targeted therapy and promote appropriate antimicrobial stewardship in acute biliary infections.

Indexed as

acute biliary infectionacute cholecystitisantimicrobial resistanceblood culture identification 2multiplex PCR system

Identifiers

PMID41244674
PMCPMC12611922

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.