Evidence map›Paper›PMID 41243976›Full record

ArticleNucleic acids research2026

Spatial GWAS Atlas: a knowledgebase for decoding the genetic architecture of complex traits in spatial resolution.

Hongen Kang, Xiaoxi Jing, Jiecong Lin, Siyu Pan, Jiaxiang Zhang, Junpeng Zhao, Yajie Zhao

Abstract read
In one paragraph

Article in Nucleic acids research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Hongen KangChangping Laboratory, Beijing 102206, China.ORCID 0000-0002-9581-1329
Xiaoxi JingChangping Laboratory, Beijing 102206, China.
Jiecong LinChangping Laboratory, Beijing 102206, China.
Siyu PanRenal Electrolyte and Hypertension Division, Department of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, United States.
Jiaxiang ZhangChangping Laboratory, Beijing 102206, China.
Junpeng ZhaoChangping Laboratory, Beijing 102206, China.
Yajie ZhaoChangping Laboratory, Beijing 102206, China.

Funding

Changping Laboratory
6 · The paper itself

Abstract

Genome-wide association studies (GWAS) have identified a large number of variants linked to complex traits and diseases, most of which lie in noncoding regions and act in a tissue- and cell type-specific manner. However, how these genetic effects are distributed within the spatial architecture of tissues remains poorly understood. Spatial transcriptomics (ST) profiles gene expression while preserving spatial coordinates, offering a powerful way to localize genetic effects within tissue architecture. Here, we present the Spatial GWAS Atlas (https://zhaolab.cpl.ac.cn/spatialgwas), the first comprehensive resource systematically integrating GWAS summary statistics with ST data to map trait-associated cells at single-cell resolution with spatial context. By leveraging 3854 curated GWAS datasets spanning diverse traits and 635 ST datasets across multiple species, tissues, and platforms, we identified extensive trait-region and trait-spot associations. The database provides keyword search, multicriteria browsing, interactive visualization, and bulk download capabilities. By linking genetic association signals to spatially resolved transcriptomics, the Spatial GWAS Atlas enables high-resolution dissection of the cellular and spatial basis of complex traits, facilitating mechanistic studies, therapeutic target discovery, and precision medicine applications.

Indexed as

Databases, GeneticGenome-Wide Association StudyKnowledge BasesMultifactorial InheritanceQuantitative Trait LociAnimalsGene Expression ProfilingHumansPolymorphism, Single NucleotideSoftwareTranscriptome

Identifiers

PMID41243976
PMCPMC12807776

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.