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ArticleMetabolomics : Official journal of the Metabolomic Society2025

Integrating metabolomics and microbiomics reveals the microbial and metabolic profiles of fermented Lentinus polychrous Lév sausages.

Sirinuch Timun, Supawit Ngoennet, Pichamon Pongnonthachai, Romteera Kittichaiworakul, Supakorn Sittivech, Napat Kumfu, Varis Lerdthusnee, Nattawee Tarapitakwong, Woranontee Korsieporn, Sivamoke Dissook

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Article in Metabolomics : Official journal of the Metabolomic Society, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

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10 authors.

Sirinuch TimunFaculty of Medicine, Chiang Mai University, Chiang Mai, Thailand.
Supawit NgoennetFaculty of Medicine, Chiang Mai University, Chiang Mai, Thailand.
Pichamon PongnonthachaiFaculty of Medicine, Chiang Mai University, Chiang Mai, Thailand.
Romteera KittichaiworakulDepartment of Biochemistry, Faculty of Medicine, Chiang Mai University, Chiang Mai, Thailand.
Supakorn SittivechFaculty of Medicine, Chiang Mai University, Chiang Mai, Thailand.
Napat KumfuFaculty of Medicine, Chiang Mai University, Chiang Mai, Thailand.
Varis LerdthusneeFaculty of Medicine, Chiang Mai University, Chiang Mai, Thailand.
Nattawee TarapitakwongFaculty of Medicine, Chiang Mai University, Chiang Mai, Thailand.
Woranontee KorsiepornDepartment of Biochemistry, Faculty of Medicine, Chiang Mai University, Chiang Mai, Thailand.
Sivamoke DissookDepartment of Biochemistry, Faculty of Medicine, Chiang Mai University, Chiang Mai, Thailand. sivamoke.dis@cmu.ac.th.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionFermentation relies on the interaction of microorganisms to enhance flavor, extend shelf life, and improve health. Lentinus polychrous Lév., a mushroom native to Northern Thailand with prebiotic properties, is commonly used in traditional fermented foods; however, the microbial and nutritional characteristics of fermented mushroom sausages have received limited scientific attention.

objectiveTo investigate changes in microbial communities and metabolite profiles during fermentation.

methodWe applied an integrated microbiomic and metabolomic approach to assess the effects of fermentation on Lentinus polychrous Lév. mushrooms. Mushroom samples were fermented for up to three days. Bacterial profiles were analyzed using 16S rRNA gene sequencing, while metabolic changes were characterized by LC-MS/MS.

resultsMicrobiomics revealed a clear succession from initial Bacillus dominance to a Weissella-dominated community. Concurrently, metabolomics identified 107 metabolites. Key metabolic shifts included decreases in gentiobiose, phenylalanine, and isoleucine, alongside increases in L-tryptophan, beta-hydroxyisovaleric acid, and specific lipids after fermentation. Epicatechin also increased. Correlation analysis showed strong positive associations between Weissella and most differential metabolites, suggesting a crucial role for Weissella in fermentation.

conclusionThis study demonstrated dynamic shifts from Bacillus to Weissella during Lentinus polychrous Lév sausage fermentation, accompanied by significant metabolic changes. Weissella dominance correlated with enhanced nutrient bioavailability, underscoring the potential of this traditional fermented food as a functional food for health promotion.

Indexed as

Fermented FoodsLentinulaMeat ProductsMetabolomeMetabolomicsMicrobiotaFermentationFood MicrobiologyRNA, Ribosomal, 16SRNA, Ribosomal, 16SFermentationMetabolomicsMicrobiomicsMushroom

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.