Evidence map›Paper›PMID 41237208›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2025

Neurodevelopmental disorder-linked Argonaute mutations permit delayed RISC formation and unusual shortening of miRNAs by 3'→5' trimming.

Andrew Savidge, Huaqun Zhang, Vishal Annasaheb Adhav, Audrey C Kehling, GeunYoung Sim, Zhangfei Shen, Tian-Min Fu, Kotaro Nakanishi

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Andrew SavidgeOhio State Biochemistry Program, The Ohio State University, Columbus, OH 43210.ORCID 0000-0002-1581-9321
Huaqun ZhangDepartment of Chemistry and Biochemistry, The Ohio State University, Columbus, OH 43210.ORCID 0000-0001-9627-3422
Vishal Annasaheb AdhavDepartment of Chemistry and Biochemistry, The Ohio State University, Columbus, OH 43210.
Audrey C KehlingDepartment of Chemistry and Biochemistry, The Ohio State University, Columbus, OH 43210.ORCID 0000-0003-2160-173X
GeunYoung SimCenter for RNA Biology, The Ohio State University, Columbus, OH 43210.ORCID 0000-0002-4850-6348
Zhangfei ShenDepartment of Biological Chemistry and Pharmacology, The Ohio State University, Columbus, OH 43210.ORCID 0000-0002-3707-2265
Tian-Min FuOhio State Biochemistry Program, The Ohio State University, Columbus, OH 43210.ORCID 0000-0002-6281-1752
Kotaro NakanishiOhio State Biochemistry Program, The Ohio State University, Columbus, OH 43210.ORCID 0000-0002-9857-6010

Funding

Target specificity of human RNA-induced silencing complexR01GM124320 · NIGMS · OHIO STATE UNIVERSITY · PI NAKANISHI, KOTARO · 2017 to 2025
$3.1M
Cellular, molecular, and biochemical sciences training grantT32GM141955 · NIGMS · OHIO STATE UNIVERSITY · PI Jane Elizabeth Jackman, JESSE J KWIEK · 2021 to 2026
$2.2M
Structural and molecular basis for cityRNA(cleavage-inducing tiny RNA)-directed RNA cleavage by AGO3R01GM138997 · NIGMS · OHIO STATE UNIVERSITY · PI NAKANISHI, KOTARO · 2020 to 2025
$2.1M
Tiny RNAs as new potential biomarkers for gammaherpesvirus-driven neurological and central nervous system diseasesR21AI178624 · NIAID · OHIO STATE UNIVERSITY · PI NAKANISHI, KOTARO · 2023 to 2024
$425k
HHS | NIH | National Institute of General Medical Sciences (NIGMS) R01GM124320HHS | NIH | National Institute of General Medical Sciences (NIGMS) R01GM138997HHS | NIH | National Institute of General Medical Sciences (NIGMS) R21AI178624HHS | NIH | National Institute of General Medical Sciences (NIGMS) T32GM141955NIAID NIH HHS R21 AI178624NIGMS NIH HHS R01 GM124320NIGMS NIH HHS R01 GM138997NIGMS NIH HHS T32 GM141955
6 · The paper itself

Abstract

Mutations in Argonaute proteins (AGOs) cause Argonaute syndrome, a neurodevelopmental disorder (NDD), yet the underlying molecular mechanism remains unclear. We determined cryo-electron microscopy (cryo-EM) structures of wild-type (WT) AGO1 and the recurrent, severe causative ΔF180 mutant. AGO1(ΔF180) unexpectedly rearranges the hydrophobic core of the L1 domain to preserve the overall RNA-induced silencing complexes (RISC) architecture and recognize guide RNAs similarly to WT. Functionally, the mutant binds target RNAs like WT but more frequently retains passenger strands, implicating a defect in RISC assembly. Biochemical assays of ΔF180 and L190P mutants revealed normal duplex loading but impaired passenger ejection, exposing guide 3' ends to 3'→5' exonucleases and generating abnormally short ~11-nucleotide RNAs. In cells, AGO1(ΔF180), AGO1(G199S), and corresponding AGO2 mutants likewise produced truncated guides. Together, these findings support a model in which defective passenger ejection underlies the pathology of AGO-associated NDDs by rendering microRNAs bound to AGO syndrome mutants susceptible to aberrant 3' trimming.

Indexed as

Argonaute ProteinsMicroRNAsMutationNeurodevelopmental DisordersRNA-Induced Silencing ComplexAnimalsCryoelectron MicroscopyEukaryotic Initiation FactorsHumansAGO1 protein, humanAGO2 protein, humanArgonaute ProteinsEukaryotic Initiation FactorsMicroRNAsRNA-Induced Silencing Complexneurodevelopmental disordernoncoding RNAsRNAi

Identifiers

PMID41237208
PMCPMC12646310

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.