ArticleScientific data2025
Near telomere to telomere genome assembly of Chinese yellow rabbit (Oryctolagus cuniculus).
Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
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Who cites it
3 citing papers in PubMed.
- Transcriptomic Analysis in the Liver of Two Rabbit Lines Divergently Selected for Intramuscular Fat Content.Animal genetics · 2026Article
- A Near-Telomere-to-Telomere Genome Assembly of the Spotted Seal (International journal of molecular sciences · 2026Article
- Telomere to telomere level genome assembly of the Yarkand hare (Lepus yarkandensis).Scientific data · 2026Article
Corrections and comments
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Authors and funding
14 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Oryctolagus cuniculus (Fujian Yellow Rabbit; FJY), the only indigenous rabbit breed in China, known for its yellow coat, adaptability, and higher meat quality. However, comprehensive genomic datasets on O. cuniculus -FJY are lacking. In this study, we assembled the nearly full telomere-to-telomere (T2T) genome of O. cuniculus -FJY, 68% T2T, using PacBio HiFi, ONT ultra-long, and Hi-C data. The 2.88 Gb assembly was anchored into 23 chromosomes (21 autosomes, X and Y), with 99.80% of the sequence successfully assigned to chromosomal positions. Scaffold N50 reached 148.90 Mb, and glires BUSCO completeness of 98.3%. Repeats account for 47.09% of the genome. We identified 22,674 genes, with 99.74% functionally annotated. Additionally, we annotated 1,341 tRNAs, 922 rRNAs, 635 miRNAs, and 2,421 snRNAs. This genome represents the closest T2T rabbit genome and the first successful assembly of the Y chromosome in O. cuniculus. It not only enhances our understanding of the genetic diversity and evolutionary history of the domestication of rabbits, but also provides crucial data support for future breeding research on O. cuniculus-FJY.
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Registered trials
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