Evidence map›Paper›PMID 41233350›Full record

ArticleScientific data2025

Dynamics of the DNA Viral Community in Korean Coastal Waters.

Yu Jin Kim, Kang Eun Kim, Hyun-Jung Kim, Joon Sang Park, Min-Jeong Kim, Seon Min Kim, Taehee Lee, Seung Won Jung

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yu Jin KimLibrary of Marine Samples, Korea Institute of Ocean Science & Technology, Geoje, 53211, Republic of Korea.
Kang Eun KimLibrary of Marine Samples, Korea Institute of Ocean Science & Technology, Geoje, 53211, Republic of Korea.
Hyun-Jung KimLibrary of Marine Samples, Korea Institute of Ocean Science & Technology, Geoje, 53211, Republic of Korea.
Joon Sang ParkLibrary of Marine Samples, Korea Institute of Ocean Science & Technology, Geoje, 53211, Republic of Korea.
Min-Jeong KimLibrary of Marine Samples, Korea Institute of Ocean Science & Technology, Geoje, 53211, Republic of Korea.
Seon Min KimLibrary of Marine Samples, Korea Institute of Ocean Science & Technology, Geoje, 53211, Republic of Korea.
Taehee LeeTrophical & Subtrophical Research Center, Korea Institute of Ocean Science and Technology, Jeju, 63349, Republic of Korea.
Seung Won JungLibrary of Marine Samples, Korea Institute of Ocean Science & Technology, Geoje, 53211, Republic of Korea. diatoms@kiost.ac.kr.ORCID 0000-0002-7473-7924

Funding

Korea Institute of Marine Science and Technology promotion (Korea Institute of Marine Science & Technology promotion) RS-2021-KS211475
6 · The paper itself

Abstract

Recent advances in metaviromics have revealed vast viral diversity across aquatic environments, yet coastal marine viromes remain underexplored compared to their open-ocean counterparts. In this study, we analyzed 49 surface water samples from 16 coastal sites around Korea, generating 265 gigabases of metagenomic sequence data. Following quality control, 754 DNA viral contigs of ≥10 kb (medium quality or higher) were recovered, with bacteriophages comprising 95% and nucleocytoplasmic large DNA viruses (NCLDVs) 5% of the total. Among these, Puniceispirillum phage HMO-2011 and Micromonas pusilla virus 12 T exhibited the highest relative abundance within their respective groups. In addition, we provided the dataset of environmental parameters such as water temperature, salinity, etc., as well as viral taxonomic profiling of contig-level metadata. This dataset provides a resource for the investigation of coastal DNA viral communities and supports comparative studies across marine environments.

Indexed as

DNA VirusesSeawaterViromeBacteriophagesDNA, ViralMetagenomicsRepublic of KoreaDNA, Viral

Identifiers

PMID41233350
PMCPMC12615691

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.