Evidence map›Paper›PMID 41231971›Full record

ArticleScience (New York, N.Y.)2026

Recurrent acquisition of nuclease-protease pairs in antiviral immunity.

Owen T Tuck, Jason J Hu, Santiago C Lopez, Benjamin A Adler, Claire E O'Brien, Kendall Hsieh, Charlotte Meredith, Kenneth J Loi, Peter H Yoon, Erin E Doherty and 2 more

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Owen T Tuck *Department of Chemistry, University of California, Berkeley, Berkeley, CA, USA.ORCID 0000-0002-0348-6910
Jason J Hu *Innovative Genomics Institute, University of California, Berkeley, Berkeley, CA, USA.ORCID 0000-0002-1103-2177
Santiago C LopezInnovative Genomics Institute, University of California, Berkeley, Berkeley, CA, USA.ORCID 0000-0001-7576-2438
Benjamin A AdlerInnovative Genomics Institute, University of California, Berkeley, Berkeley, CA, USA.ORCID 0000-0002-7488-3040
Claire E O'BrienInnovative Genomics Institute, University of California, Berkeley, Berkeley, CA, USA.ORCID 0009-0002-9782-2846
Kendall HsiehInnovative Genomics Institute, University of California, Berkeley, Berkeley, CA, USA.
Charlotte MeredithInnovative Genomics Institute, University of California, Berkeley, Berkeley, CA, USA.ORCID 0009-0002-4597-3239
Kenneth J LoiInnovative Genomics Institute, University of California, Berkeley, Berkeley, CA, USA.ORCID 0009-0009-5508-6511
Peter H YoonInnovative Genomics Institute, University of California, Berkeley, Berkeley, CA, USA.ORCID 0000-0002-9156-1393
Erin E DohertyInnovative Genomics Institute, University of California, Berkeley, Berkeley, CA, USA.ORCID 0000-0002-1555-4124
Arushi LahiriInnovative Genomics Institute, University of California, Berkeley, Berkeley, CA, USA.ORCID 0000-0001-6834-4692
Jennifer A DoudnaDepartment of Chemistry, University of California, Berkeley, Berkeley, CA, USA.ORCID 0000-0001-9161-999X

Funding

RESEARCH PROJECT 2U19AI135990 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ANDREJ SALI · 2018 to 2026
$21.4M
High Definition Ion Mobility SpectrometerS10OD020062 · OD · UNIVERSITY OF CALIFORNIA BERKELEY · PI WILLIAMS, EVAN R · 2015 to 2015
$590k
Precision Deaminases to Expand the Scope of Diseases Amenable to CRISPR-mediated CorrectionF32GM153031 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI Erin E Doherty · 2024 to 2026
$229k
Howard Hughes Medical InstituteNIAID NIH HHS U19 AI135990NIGMS NIH HHS F32 GM153031NIH HHS S10 OD020062
6 · The paper itself

Abstract

Antiviral immune systems diversify by integrating new genes into existing pathways, creating new mechanisms of viral resistance. We identified genes encoding a predicted nuclease paired with a trypsin-like protease repeatedly acquired by multiple, otherwise unrelated antiviral immune systems in bacteria. Cell-based and biochemical assays revealed that the nuclease is a proenzyme that cleaves DNA only after activation by its partner protease. Two distinct immune systems, Hachiman and AVAST (antiviral adenosine triphosphatase/nucleoside triphosphatase of the STAND superfamily, Avs), use the same mechanism of proteolytic activation despite their independent evolutionary origins. Examination of nuclease-protease inheritance patterns identified caspase-nuclease (

Indexed as

BacteriaBacterial ProteinsBacteriophagesCaspasesDeoxyribonucleasesPeptide HydrolasesDNA CleavageEvolution, MolecularProteolysisBacterial ProteinsCaspasesDeoxyribonucleasesPeptide Hydrolases

Identifiers

PMID41231971
PMCPMC12799240

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.