Evidence map›Paper›PMID 41231662›Full record

ArticleMedical physics2025

Probabilistic template matching for detecting resting-state functional MRI language network in brain tumor patients.

Jian Ming Teo, Vinodh A Kumar, Alexander M Khalaf, Kyle R Noll, Sherise D Ferguson, Chibawanye I Ene, Sujit S Prabhu, Max Wintermark, Ho-Ling Liu

Abstract read
In one paragraph

Article in Medical physics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jian Ming TeoDepartment of Imaging Physics, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Vinodh A KumarDepartment of Neuroradiology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Alexander M KhalafDepartment of Neuroradiology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Kyle R NollDepartment of Neuro-Oncology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Sherise D FergusonDepartment of Neurosurgery, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Chibawanye I EneDepartment of Neurosurgery, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Sujit S PrabhuDepartment of Neurosurgery, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Max WintermarkDepartment of Neuroradiology, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.
Ho-Ling LiuDepartment of Imaging Physics, The University of Texas MD Anderson Cancer Center, Houston, Texas, USA.

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
A Comprehensive Clinical fMRI Software Solution to Enable Mapping of Critical Functional Networks and Cerebrovascular Reactivity in the BrainR01CA258788 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI CATHERINE L ELSINGER, Ho-Ling Anthony Liu · 2022 to 2026
$2.2M
NCI NIH HHS P30 CA016672NCI NIH HHS R01 CA258788NIH/NCI P30CA016672NIH/NCI R01CA258788
6 · The paper itself

Abstract

backgroundIntersubject variation among patients with brain tumors complicates the template matching process for detecting the resting-state (rs) functional MRI (fMRI) language network when using independent component analysis (ICA). PURPOSE: This study aimed to develop methods that use a probabilistic language atlas to incorporate intersubject variation in brain tumor patients into the template matching process.

methodsThis retrospective study included 79 patients with brain tumors (average age, 50 ± 15 years) who underwent presurgical task-based (tb)-fMRI and rs-fMRI at clinical 3T scanners. At varying template generation thresholds (τ), binary and probabilistic templates were obtained from the language atlas. A binary template developed using healthy individuals and applied in published studies was tested as a control. Binary templates with goodness-of-fit (GOF) and probabilistic templates with weighted GOF (wGOF) or Jensen-Shannon distance (JSD) were used for template matching to recommend language networks from ICA. Dice coefficient and Pearson correlation with respect to tb-fMRI were assessed. Qualitative evaluation was performed by two neuroradiologists. Significant differences in Dice coefficients and Pearson correlations between different template matching methods, and significant differences between ratings were determined with the Wilcoxon signed-rank test, with p < 0.05 indicating statistical significance.

resultsCompared to the control, recommendations from methods involving probabilistic language templates had significantly higher (p < 0.05) Dice coefficients across τ = 0% to τ = 35%. Pearson correlation results followed similar trends to those for Dice coefficient. Dice coefficients with the control were found to be 0.247 on average. Peak Dice coefficients with using wGOF and JSD for template matching were found to be 0.349 and 0.350, on average, respectively. Likert score results indicated significantly superior performance (p < 0.05) in identifying ICA components that contain the language network by using probabilistic language templates. 58 and 52 of 79 recommendations for the control were found to contain the language network (Likert scores ≥4) based on rater 1 and 2, respectively, which increased to 69-73 with template matching using wGOF and JSD.

conclusionsThe proposed application of probabilistic templates derived from a language tb-fMRI atlas of patients with brain tumors and probabilistic template matching methods can improve detection of rs-fMRI ICA language network in brain tumor patients.

Indexed as

Brain NeoplasmsImage Processing, Computer-AssistedLanguageMagnetic Resonance ImagingRestAdultAgedFemaleHumansMaleMiddle AgedProbabilityRetrospective Studiesbrain tumorindependent component analysisresting‐state functional MRI

Identifiers

PMID41231662
PMCPMC12614290

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.