Evidence map›Paper›PMID 41229888›Full record

ArticleBiophysics reports2025

Bacterial restriction-modification systems: mechanisms of defense against phage infection.

Haoyang Kang, Ang Gao, Yalan Zhu

Abstract read
In one paragraph

Article in Biophysics reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Review
  3. Bacterial immune systems.Antonie van Leeuwenhoek · 2026
    Review
  4. Characterization of a novel phage-plasmid vB_EcoM_ED targeting multidrug-resistant Escherichia coli isolates.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
    Article
  5. Article
  6. Article
  7. A methylome-derived mbioRxiv : the preprint server for biology · 2026
    Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Haoyang KangSchool of Life Science, Beijing Institute of Technology, Beijing 100086, China.
Ang GaoSchool of Life Science, Beijing Institute of Technology, Beijing 100086, China.
Yalan ZhuSchool of Life Science, Beijing Institute of Technology, Beijing 100086, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacteria have evolved various defense mechanisms against bacteriophage invasion, driven by a long-term evolutionary arms race. Among them, restriction-modification (R-M) systems, which protect bacteria by DNA restriction and modification, are prominent. R-M systems are categorized based on their DNA methylation mechanisms, restriction activities, and cofactor dependencies. Here, we review the molecular basis of R-M systems and the diverse strategies used by bacteriophages to evade these defenses. Furthermore, we highlight the co-evolutionary dynamics between R-M systems and phage countermeasures, providing insights into new approaches to combat bacterial resistance and pathogenicity. Beyond their defensive roles, the multifunctionality of R-M systems in broader biological and biotechnological contexts is also discussed.

Indexed as

Anti-restrictionBacteriophageDNA ModificationDNA RestrictionR-M system

Identifiers

PMID41229888
PMCPMC12602166

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.