Evidence map›Paper›PMID 41229447›Full record

ArticleTurkish journal of biology = Turk biyoloji dergisi2025

Evaluating SH-SY5Y cells as a dopaminergic neuronal model: morphological, transcriptomic, and proteomic insights.

Eylül Ece Işlek Camadan, Mehmet Sarihan, Murat Kasap, Gürler Akpinar, Elifcan Koçyiğit

Abstract read
In one paragraph

Article in Turkish journal of biology = Turk biyoloji dergisi, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Eylül Ece Işlek CamadanProteomics Laboratory, Department of Medical Biology, Faculty of Medicine, Kocaeli University, Kocaeli, Turkiye.ORCID https://orcid.org/0000-0002-6722-2623
Mehmet SarihanProteomics Laboratory, Department of Medical Biology, Faculty of Medicine, Kocaeli University, Kocaeli, Turkiye.ORCID https://orcid.org/0000-0002-1565-5718
Murat KasapProteomics Laboratory, Department of Medical Biology, Faculty of Medicine, Kocaeli University, Kocaeli, Turkiye.ORCID https://orcid.org/0000-0001-8527-2096
Gürler AkpinarProteomics Laboratory, Department of Medical Biology, Faculty of Medicine, Kocaeli University, Kocaeli, Turkiye.ORCID https://orcid.org/0000-0002-9675-3714
Elifcan KoçyiğitProteomics Laboratory, Department of Medical Biology, Faculty of Medicine, Kocaeli University, Kocaeli, Turkiye.ORCID https://orcid.org/0000-0003-4709-7519

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background/aim: The SH-SY5Y neuroblastoma cell line is a popular in vitro model for neurodegenerative disease research, especially Parkinsons disease (PD) research, but its use is complicated by limitations like the persistence of neuroblastoma-like features, unstable differentiation, mitochondrial dysfunction, and cellular stress. To address these limitations, this study tested a blended, nine-day differentiation protocol that sequentially applied all-trans retinoic acid (RA), brain-derived neurotrophic factor (BDNF), and dibutyryl cyclic adenosine monophosphate (dbcAMP). By evaluating key neuronal, dopaminergic, and PD-related markers, the research aims to determine if these differentiated SH-SY5Y cells are a suitable model for studying PD. Materials and methods: A blended differentiation protocol using RA, BDNF, and dbcAMP was applied to SH-SY5Y cells. Morphological changes were evaluated by immunofluorescence microscopy. Furthermore, mostly dopaminergic neuronal markers associated with PD were used for characterization purposes. Nanoliquid chromatography coupled with tandem mass spectrometry proteome analysis was performed to identify changes in protein expression related to differentiation. Results: Differentiation led to neuron-like morphology with extended neurites. Gene expression analyses revealed upregulation of several neuronal markers, such as Nestin and MAP2, indicating progression from progenitor to neuron-like states. Furthermore, some dopaminergic markers, such as TH and Nurr1, showed elevated expression with asynchronous expression patterns, suggesting heterogeneity in the differentiation process. Proteomic analysis indicated significant changes in cell differentiation and neurogenesis. Transient expression of key neuronal markers was observed. The cells required continuous external stimuli. Conclusion: While SH-SY5Y cells exhibited dopaminergic characteristics following the blended differentiation protocol, the transient expression of key neuronal markers and the need for continuous external stimuli raised concerns about the stability and functional maturity of these differentiated cells as an in vitro PD model. These findings suggest that SH-SY5Y cells might not fully capture the properties of mature neurons.

Indexed as

dopaminergic markersNeurogenic differentiationParkinsons Disease modelSH-SY5Y cells

Identifiers

PMID41229447
PMCPMC12604937

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.