Evidence map›Paper›PMID 41225325›Full record

ArticleBMC microbiology2025

Plant identity and environmental filtering are the key drivers of bacterial community structure in four desert plant species from the Sahara Desert in Morocco.

Hafsa Debbagh-Nour, Said Khourchi, Ayoub El Mouttaqi, Rachid Elfermi, Anass Bourazza, Oscar Pascal Malou, Marc Ducousso, Hassan Boukcim, Mohamed Hijri, Abdelaziz Hirich

Abstract read
In one paragraph

Article in BMC microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Hafsa Debbagh-NourAfrican Sustainable Agriculture Research Institute (ASARI), College of Agriculture & Environmental Sciences (CAES), Mohammed VI Polytechnic University (UM6P), Laayoune, 70000, Morocco. hafsa.debbagh-nour@um6p.ma.
Said KhourchiAfrican Sustainable Agriculture Research Institute (ASARI), College of Agriculture & Environmental Sciences (CAES), Mohammed VI Polytechnic University (UM6P), Laayoune, 70000, Morocco.
Ayoub El MouttaqiAfrican Sustainable Agriculture Research Institute (ASARI), College of Agriculture & Environmental Sciences (CAES), Mohammed VI Polytechnic University (UM6P), Laayoune, 70000, Morocco.
Rachid ElfermiAfrican Genome Center (AGC), Mohammed VI Polytechnic University (UM6P), Benguerir, 43150, Morocco.
Anass BourazzaAfrican Sustainable Agriculture Research Institute (ASARI), College of Agriculture & Environmental Sciences (CAES), Mohammed VI Polytechnic University (UM6P), Laayoune, 70000, Morocco.
Oscar Pascal MalouVALORHIZ SAS, 912 Rue de La Croix Verte, Montpellier, 34090, France.
Marc DucoussoCIRAD, UMR AGAP-Institut, TA A-108/03, 34398, Montpellier cedex 5, France.
Hassan BoukcimAfrican Sustainable Agriculture Research Institute (ASARI), College of Agriculture & Environmental Sciences (CAES), Mohammed VI Polytechnic University (UM6P), Laayoune, 70000, Morocco.
Mohamed HijriAfrican Genome Center (AGC), Mohammed VI Polytechnic University (UM6P), Benguerir, 43150, Morocco.
Abdelaziz HirichAfrican Sustainable Agriculture Research Institute (ASARI), College of Agriculture & Environmental Sciences (CAES), Mohammed VI Polytechnic University (UM6P), Laayoune, 70000, Morocco.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPlant microbiome is a very wide research area playing a major role in agriculture and plant health. This study investigates the interactions between root-associated bacterial communities and soil physico-chemical characteristics of four Moroccan desert plant species: Lavandula coronopifolia Poir. (n = 20), Lycium intricatum Boiss. (n = 20), Nitraria retusa Asch. (n = 20) and Searsia tripartita (Ucria) Moffett. (n = 20). Soil samples were collected in the rhizosphere of each plant species, and root samples from four different sites, with five random samples per site. Elemental chemical composition of soil sample was analyzed using the X-Ray fluorescence spectrometry and soil carbon, i.e., organic carbon (SOC) and inorganic carbon (SIC) were measured using the Rock-Eval® Oxypure method. Roots were assessed for their microbial community, using the 16S rDNA metabarcoding analysis.

resultsSignificant variation in soil parameters was observed across sites and among the four desert plant species. SOC and SIC contents were highest in soils associated with S. tripartita, N. retusa, and Ly. intricatum, while La. coronopifolia was associated with elevated levels of Si, Al, K, and Mn. Soil EC was highest in N. retusa and S. tripartita. Microbial analysis revealed that Pseudomonadota and Actinomycetota dominated the root-associated bacterial communities, comprising around 60% of total abundance. Alpha diversity (Shannon and Simpson indices) varied significantly across species and sites, especially in La. coronopifolia. Beta diversity analyzes confirmed that geographic location significantly influenced microbial community structure. Rhizosphere network complexity and composition varied by species, with N. retusa showing broad ecological tolerance, while S. tripartita communities were strongly shaped by SOC, SIC, K, Ca, Mn, and Fe. Mantel test results further highlighted that plant identity and environmental factors differentially influence root microbial composition across sites.

conclusionEach plant species showed unique responses in terms of soil characteristics and microbial communities, highlighting the importance of adopting a species-specific approach.

Indexed as

BacteriaMicrobiotaPlantsSoil MicrobiologyCarbonDesert ClimateDNA, BacterialMoroccoPlant RootsRhizosphereRNA, Ribosomal, 16SSoilCarbonDNA, BacterialRNA, Ribosomal, 16SSoilDesert plantMicrobial diversityRoot-associated bacteriaSoil propertiesX-ray fluorescence

Identifiers

PMID41225325
PMCPMC12613618

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.