Evidence map›Paper›PMID 41223189›Full record

ArticlePloS one2025

Transcriptomic and experimental evidence confirm the potential of disulfidptosis-related signature for the early diagnosis and treatment of liver cirrhosis.

Yiqian Liu, Ruixin Zhang, Xiaojie Sun, Wei Cui, Lixin Liu

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yiqian LiuDepartment of Gastroenterology and Hepatology, The First Hospital of Shanxi Medical University, Taiyuan, China.
Ruixin ZhangDepartment of Gastroenterology and Hepatology, The First Hospital of Shanxi Medical University, Taiyuan, China.
Xiaojie SunDepartment of Health Management, The Sixth Clinical Medical College of Shanxi Medical University (Sixth Hospital of Shanxi Medical University), Taiyuan, China.
Wei CuiDepartment of Pathology, Shanxi Province Cancer Hospital/Shanxi Hospital Affiliated to Cancer Hospital, Chinese Academy of Medical Sciences/Cancer Hospital Affiliated to Shanxi Medical University, Taiyuan, China.
Lixin LiuDepartment of Gastroenterology and Hepatology, The First Hospital of Shanxi Medical University, Taiyuan, China.ORCID https://orcid.org/0000-0001-7585-9432

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cirrhosis is a common endpoint in various chronic liver diseases, and often causes hepatocellular carcinoma. Studies have revealed the significant role of disulfidptosis in the occurrence and development of hepatocellular carcinoma; however, our understanding of this role is limited. Therefore, we aimed to identify potential disulfidptosis-related biomarkers for cirrhosis. We obtained the gene expression data of patients with cirrhosis from the Gene Expression Omnibus (GEO) database. Subsequently, weighted gene co-expression network analysis was performed, and the "limma" package was used to screen for differentially expressed genes (DEGs) associated with disulfidptosis. Significantly altered biological pathways were identified using Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), Gene Set Enrichment Analysis (GSEA), and Gene Set Variation Analysis (GSVA). We constructed protein-protein interaction (PPI) networks using GeneMANIA and generated receiver operating characteristic (ROC) curves to identify hub-shared genes. Additionally, we assessed the distribution of immune cell populations in cirrhotic and control specimens using single-sample GSEA (ssGSEA) and explored their relationship with hub genes. Six hub genes (CXCL12, COL1A1, CXCR4, COL1A2, CCR7, and CXCL8) were closely associated with disulfidptosis-related DEGs. Further immunohistochemical experiments confirmed the potential of CCR7, CXCL12, CXCR4, and CXCL8 as novel diagnostic biomarkers and suggested their potential as new therapeutic targets. These genes mainly promote the development of liver cirrhosis through the oxidative metabolism and cytokine pathways. Furthermore, we observed positive correlations among 23 of the 28 types of immune cells. This study highlights the potential utility of immune cell infiltration and efficient disulfidptosis-related early diagnostic biomarkers in cirrhosis, and highlights its strong useful as a therapeutic target, offering potential clinical application value.

Indexed as

Liver CirrhosisTranscriptomeChemokine CXCL12Collagen Type I, alpha 1 ChainDisulfidptosisEarly DiagnosisGene Expression ProfilingGene Regulatory NetworksHumansProtein Interaction MapsReceptors, CCR7Receptors, CXCR4CCR7 protein, humanChemokine CXCL12Collagen Type I, alpha 1 ChainCXCL12 protein, humanCXCR4 protein, humanReceptors, CCR7Receptors, CXCR4

Identifiers

PMID41223189
PMCPMC12611156

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.