Evidence map›Paper›PMID 41222641›Full record

ArticleCancer immunology, immunotherapy : CII2025

Integrative analysis of single-cell and bulk transcriptome data reveals age-related immune cell alterations in primary glioblastoma associated with prognosis.

Zefan Jing, Bojun Qiu, Chenyang Ai, Chunhui Wang, Xinrun Wang, Boyang Li, Lin Hou, Bin Yin, Wei Han, Xiaozhong Peng

Abstract read
In one paragraph

Article in Cancer immunology, immunotherapy : CII, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Zefan JingState Key Laboratory of Common Mechanism Research for Major Diseases, Department of Biochemistry and Molecular Biology, Medical Primate Research Center, Neuroscience Center, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing, 100005, China.
Bojun QiuState Key Laboratory of Common Mechanism Research for Major Diseases, Department of Biochemistry and Molecular Biology, Medical Primate Research Center, Neuroscience Center, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing, 100005, China.
Chenyang AiState Key Laboratory of Common Mechanism Research for Major Diseases, Department of Biochemistry and Molecular Biology, Medical Primate Research Center, Neuroscience Center, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing, 100005, China.
Chunhui WangState Key Laboratory of Common Mechanism Research for Major Diseases, Department of Biochemistry and Molecular Biology, Medical Primate Research Center, Neuroscience Center, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing, 100005, China.
Xinrun WangState Key Laboratory of Common Mechanism Research for Major Diseases, Department of Biochemistry and Molecular Biology, Medical Primate Research Center, Neuroscience Center, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing, 100005, China.
Boyang LiState Key Laboratory of Common Mechanism Research for Major Diseases, Department of Biochemistry and Molecular Biology, Medical Primate Research Center, Neuroscience Center, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing, 100005, China.
Lin HouState Key Laboratory of Common Mechanism Research for Major Diseases, Department of Biochemistry and Molecular Biology, Medical Primate Research Center, Neuroscience Center, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing, 100005, China.
Bin YinState Key Laboratory of Common Mechanism Research for Major Diseases, Department of Biochemistry and Molecular Biology, Medical Primate Research Center, Neuroscience Center, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing, 100005, China.
Wei HanState Key Laboratory of Common Mechanism Research for Major Diseases, Department of Biochemistry and Molecular Biology, Medical Primate Research Center, Neuroscience Center, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing, 100005, China.
Xiaozhong PengState Key Laboratory of Common Mechanism Research for Major Diseases, Department of Biochemistry and Molecular Biology, Medical Primate Research Center, Neuroscience Center, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing, 100005, China. pengxiaozhong@pumc.edu.cn.

Funding

Chinese Academy of Medical Sciences Innovation Fund for Medical Sciences 2021-I2M-1-024Chinese Academy of Medical Sciences Innovation Fund for Medical Sciences 2021-I2M-1-034Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, State Key Laboratory Special Fund 2060204National Key Research and Development Program of China 2022YFA1103803National Key Research and Development Program of China 2022YFC3401000National Natural Science Foundation of China 82173373
6 · The paper itself

Abstract

backgroundGlioblastoma (GBM) is the most malignant and highly recurrent brain tumor. Although over half of the GBM patients are elderly patients, the understanding of how aging affects GBM progression remains limited.

methodsClinical and genomic variation data of GBM patients from TCGA and CGGA databases were used for prognostic analysis. We collected single-cell transcriptome data of 88,908 cells from 13 primary GBM (pGBM) and 12 recurrent GBM (rGBM) patients. Age-related immune cells were identified through cell-cell communication and trajectory analysis. The results were validated by projecting the single-cell transcriptome profiles onto bulk data. Finally, we experimentally validated the results on syngeneic orthotopic models of younger and older mice.

resultsPrognostic analysis indicated the effect of age in pGBM patients is stronger than that in rGBM patients. Moreover, the mutational signatures in pGBM does not affect prognosis. Single-cell RNA sequencing analysis revealed age-related differences in immune cells between pGBM and rGBM, and identified microglia underwent significant cell state changes with aging only in pGBM patients. Next, we validated that high expression of HSPB1 in microglia from older pGBM patients is associated with poor prognosis. Finally, the syngeneic orthotopic model for aged mice exhibited more tumor invasion, with a shorter median survival time. Furthermore, the microglia within the tumor microenvironment (TME) of aged mice showed markedly high expression level of HSPB1.

conclusionsOur study highlights the crucial role of microglial aging in pGBM, reveals distinct age-related changes of immune cells in the TME between pGBM and rGBM, and offers valuable insights into clinical treatment strategies targeting elderly GBM patients.

Indexed as

AgingBrain NeoplasmsGlioblastomaTranscriptomeAgedAge FactorsAnimalsBiomarkers, TumorFemaleGene Expression ProfilingHumansMaleMiceMiddle AgedPrognosisSingle-Cell AnalysisBiomarkers, TumorAgeGlioblastomaMicrogliaPrognostic analysisSingle-cell RNA sequencing

Identifiers

PMID41222641
PMCPMC12612434

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.