Evidence map›Paper›PMID 41222160›Full record

ArticlemSystems2025

Giant viruses specific to deep oceans show persistent presence and activity.

Wenwen Liu, Komei Nagasaka, Junyi Wu, Hiroki Ban, Ethan Mimick, Lingjie Meng, Russell Y Neches, Mohammad Moniruzzaman, Takashi Yoshida, Yosuke Nishimura and 3 more

Abstract read
In one paragraph

Article in mSystems, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Wenwen LiuBioinformatics Center, Institute for Chemical Research, Kyoto University, Uji, Japan.ORCID 0009-0004-7260-2411
Komei NagasakaBioinformatics Center, Institute for Chemical Research, Kyoto University, Uji, Japan.
Junyi WuBioinformatics Center, Institute for Chemical Research, Kyoto University, Uji, Japan.
Hiroki BanHatsukaichi Field Station, Fisheries Technology Institute, Japan Fisheries Research and Education Agency, Hatsukaichi, Japan.
Ethan MimickDepartment of Marine Biology and Ecology, Rosenstiel School of Marine, Atmospheric, and Earth Science, University of Miami, Miami, Florida, USA.
Lingjie MengBioinformatics Center, Institute for Chemical Research, Kyoto University, Uji, Japan.ORCID 0000-0001-9937-8860
Russell Y NechesBioinformatics Center, Institute for Chemical Research, Kyoto University, Uji, Japan.ORCID 0000-0002-2055-8381
Mohammad MoniruzzamanDepartment of Marine Biology and Ecology, Rosenstiel School of Marine, Atmospheric, and Earth Science, University of Miami, Miami, Florida, USA.ORCID 0000-0001-9337-3874
Takashi YoshidaGraduate School of Agriculture, Kyoto University, Kyoto, Japan.
Yosuke NishimuraResearch Center for Bioscience and Nanoscience (CeBN), Research and Development Center for Marine Biosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Yokosuka, Japan.
Hisashi EndoBioinformatics Center, Institute for Chemical Research, Kyoto University, Uji, Japan.
Yusuke OkazakiBioinformatics Center, Institute for Chemical Research, Kyoto University, Uji, Japan.
Hiroyuki OgataBioinformatics Center, Institute for Chemical Research, Kyoto University, Uji, Japan.ORCID 0000-0001-6594-377X

Funding

Institute for Chemical Research, Kyoto University 2025-32, 2024-34, 2022-32Japan Society for the Promotion of Science 22H00384, 21H05057, 22H00385, 22H02420
6 · The paper itself

Abstract

Giant viruses (GVs) of the phyla

Indexed as

Giant VirusesSeawaterGenome, ViralJapanMetagenomeMetagenomicsOceans and SeasPhylogenySeasonsadaptationdeep oceangiant virusesmetatranscriptomethe Kochi Prefectural Deep Seawater Laboratory

Identifiers

PMID41222160
PMCPMC12710325

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.