Evidence map›Paper›PMID 41221803›Full record

ArticleThe Journal of antimicrobial chemotherapy2026

HIV-1 drug resistance among pregnant and breastfeeding mothers and its association with paediatric HIV infections in the Dolutegravir era in Uganda.

Anne Kapaata, Drake Byamukama, Edward Nelson Kankaka, Juliet Nkugwa Asio, Alisen Ayitewala, Isaac Ssewanyana, Willy Ssengooba, Irene Andia Biraro, Sande James Obondo, Bernard Sentalo Bagaya and 4 more

Abstract read
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Article in The Journal of antimicrobial chemotherapy, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

14 authors.

Anne KapaataUganda (Makerere University) - Case Western Reserve University Research Collaboration (UCRC), Kampala, Uganda.
Drake ByamukamaSequencing Platform, Medical Research Council/Uganda Virus Research Institute and London School of Hygiene and Tropical Medicine, Entebbe, Uganda.
Edward Nelson KankakaResearch Department, Rakai Health Sciences Program, 4-6 Sanitary Lane, Old Bukoba Road, Kalisizo, Uganda.
Juliet Nkugwa AsioDepartment of General Virology, Uganda Virus Research Institute, P.O. Box 49, Plot 51-59, Nakiwogo Road, Entebbe, Uganda.
Alisen AyitewalaCentral Public Health Laboratories, Ministry of Health, Kampala, Uganda.ORCID 0000-0001-6173-4006
Isaac SsewanyanaCentral Public Health Laboratories, Ministry of Health, Kampala, Uganda.
Willy SsengoobaSchool of Medicine, Makerere University College of Health Sciences, P.O. Box 7072, Kampala, Uganda.ORCID 0000-0002-1643-110X
Irene Andia BiraroSchool of Medicine, Makerere University College of Health Sciences, P.O. Box 7072, Kampala, Uganda.
Sande James ObondoSchool of Medicine, Makerere University College of Health Sciences, P.O. Box 7072, Kampala, Uganda.
Bernard Sentalo BagayaSchool of Medicine, Makerere University College of Health Sciences, P.O. Box 7072, Kampala, Uganda.
Lydia NakiyingiSchool of Medicine, Makerere University College of Health Sciences, P.O. Box 7072, Kampala, Uganda.
Harriet Mayanja-KizzaSchool of Medicine, Makerere University College of Health Sciences, P.O. Box 7072, Kampala, Uganda.
Sheila Nina BalindaSequencing Platform, Medical Research Council/Uganda Virus Research Institute and London School of Hygiene and Tropical Medicine, Entebbe, Uganda.
Bernard KikaireDepartment of General Virology, Uganda Virus Research Institute, P.O. Box 49, Plot 51-59, Nakiwogo Road, Entebbe, Uganda.

Funding

Africa Health Research InstituteBill & Melinda Gates FoundationGilead Sciences Inc.MITRagon Institute of Mass GeneralScience for Africa FoundationSub-Saharan African NetworkTB/HIV research excellence
6 · The paper itself

Abstract

objectivesTo determine the prevalence and patterns of HIV drug resistance mutations among pregnant and breastfeeding women in Uganda following the rollout of dolutegravir, characterize circulating HIV-1 subtypes and their association with resistance, and identify factors associated with vertical HIV transmission. MATERIALS AND

methodsThis study involved 46 pregnant and 154 breastfeeding mothers in Uganda with viral loads (VLs) >1000 copies/mL. Residual plasma underwent genotypic resistance testing on the Illumina MiSeq platform, and HIVDRMs and subtypes were interpreted using the Stanford HIVdb algorithm. Participant characteristics were summarized descriptively, and associations between subtypes, HIVDRMs, and vertical transmission were assessed using chi-square tests, t-tests, and logistic regression.

resultsAmong 200 participants, 53.0% (95% CI: 46.0-59.9) had resistance to at least one antiretroviral therapy (ART) class. HIVDRM prevalence was 41.5% (CI: 34.8-48.5) for NNRTIs, 20.5% (CI: 15.4-26.7) for NRTIs, 4.0% (CI: 2.0-7.8) for PIs and 3.5% (CI: 1.7-7.2) for INSTIs. Notably, 13.5% had accessory mutations, including T97A, which can contribute to DTG resistance. HIV-1 subtypes A (57.0%) and D (30.5%) were most common, with few subtype C (6.5%) and recombinant forms (6.0%). Subtype D and routine/repeat VL monitoring following intensive adherence counselling were associated with HIVDRMs (P = 0.01 and P = 0.04 respectively). Seven infants tested HIV-1 positive, with poor maternal adherence and repeat VL significantly associated with seropositivity (P = 0.004 and P = 0.027, respectively).

conclusionThis high HIVDRM burden highlights the urgent need for routine resistance testing, subtype-specific treatment strategies and improved ART adherence support to reduce mother-to-child-transmission, particularly in women with subtype D infections.

Indexed as

Anti-HIV AgentsBreast FeedingDrug Resistance, ViralHeterocyclic Compounds, 3-RingHIV-1HIV InfectionsInfectious Disease Transmission, VerticalPregnancy Complications, InfectiousAdultDolutegravirFemaleGenotypeHumansInfantInfant, NewbornMothersAnti-HIV AgentsDolutegravirHeterocyclic Compounds, 3-RingOxazinesPiperazinesPyridones

Identifiers

PMID41221803
PMCPMC12802964

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.