Evidence map›Paper›PMID 41219221›Full record

ArticleNature communications2025

Heterogeneity in responses to ribosome-targeting antibiotics mediated by bacterial RNA repair.

Hollie J Hindley, Zechuan Gong, Shafagh Moradian, Maria Grazia Giuliano, Andrei Sapelkin, Ioly Kotta-Loizou, Martin Buck, Christoph Engl, Andrea Y Weiße

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Hollie J HindleyCentre for Engineering Biology, School of Biological Sciences, University of Edinburgh, Edinburgh, UK.ORCID http://orcid.org/0009-0006-8109-1080
Zechuan GongDepartment of Biochemistry, Centre for Molecular Cell Biology, School of Biological and Behavioural Sciences, Queen Mary University of London, London, UK.
Shafagh MoradianDepartment of Biochemistry, Centre for Molecular Cell Biology, School of Biological and Behavioural Sciences, Queen Mary University of London, London, UK.ORCID http://orcid.org/0009-0000-6415-7902
Maria Grazia GiulianoDepartment of Biochemistry, Centre for Molecular Cell Biology, School of Biological and Behavioural Sciences, Queen Mary University of London, London, UK.
Andrei SapelkinDepartment of Physics and Astronomy, School of Physical and Chemical Sciences, Queen Mary University of London, London, UK.ORCID http://orcid.org/0000-0001-7648-8215
Ioly Kotta-LoizouDepartment of Life Sciences, Faculty of Natural Sciences, Imperial College London, London, UK.ORCID http://orcid.org/0000-0003-3277-6359
Martin BuckDepartment of Life Sciences, Faculty of Natural Sciences, Imperial College London, London, UK.ORCID http://orcid.org/0000-0002-7580-8982
Christoph EnglDepartment of Biochemistry, Centre for Molecular Cell Biology, School of Biological and Behavioural Sciences, Queen Mary University of London, London, UK. c.engl@qmul.ac.uk.ORCID http://orcid.org/0000-0003-0335-267X
Andrea Y WeißeCentre for Engineering Biology, School of Biological Sciences, University of Edinburgh, Edinburgh, UK. andrea.weisse@ed.ac.uk.ORCID http://orcid.org/0000-0001-7786-8252

Funding

Leverhulme Trust RPG-2019-092RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/W019698/1RCUK | Biotechnology and Biological Sciences Research Council (BBSRC) BB/Y004035/1Wellcome Trust
6 · The paper itself

Abstract

RNA repair is critical for cellular function. The Rtc system maintains RNA integrity within the translational machinery of bacteria. In E. coli, Rtc expression enables cells to rescue growth and survive treatment by conferring transient resistance to ribosome-targeting antibiotics, yet the mechanisms underpinning this resistance remain obscure. Here, we present a computational model of Rtc-regulated repair of translational RNAs. Integrating model predictions with experimental validations, we uncover notable cell-to-cell heterogeneity in rtc expression that impacts on translational capacity, indicating that rtc may induce a form of heteroresistance. We moreover identify Rtc targets that may reduce the translational capacity of cells and so potentiate antibiotic effects. Our findings elucidate a complex response underpinning resistance conferred by Rtc, offering alternate routes for addressing resistance in E. coli and other relevant pathogens.

Indexed as

Anti-Bacterial AgentsEscherichia coliRibosomesRNA, BacterialDrug Resistance, BacterialEscherichia coli ProteinsGene Expression Regulation, BacterialProtein BiosynthesisAnti-Bacterial AgentsEscherichia coli ProteinsRNA, Bacterial

Identifiers

PMID41219221
PMCPMC12606134

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.