Evidence map›Paper›PMID 41218129›Full record

ReviewAntimicrobial agents and chemotherapy2025

Challenges and considerations for whole-genome-based antimicrobial resistance plasmid investigations.

Jia Qi Beh, Ryan R Wick, Benjamin P Howden, Christopher H Connor, Jessica R Webb

Abstract readReview
PubMed Full text at PMC Publisher
In one paragraph

Review in Antimicrobial agents and chemotherapy, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Novel transposon TnMicrobial genomics · 2026
    Article
  3. Article
  4. Complete genome sequence of a carbapenem-resistantMicrobiology resource announcements · 2026
    Article
  5. Novel transposon TnmedRxiv : the preprint server for health sciences · 2026
    Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jia Qi BehDepartment of Microbiology and Immunology at the Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Melbourne, Australia.ORCID 0000-0002-6815-7317
Ryan R WickDepartment of Microbiology and Immunology at the Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Melbourne, Australia.
Benjamin P HowdenDepartment of Microbiology and Immunology at the Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Melbourne, Australia.ORCID 0000-0003-0237-1473
Christopher H Connor *Department of Microbiology and Immunology at the Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Melbourne, Australia.ORCID 0000-0002-1761-2412
Jessica R Webb *Department of Microbiology and Immunology at the Peter Doherty Institute for Infection and Immunity, The University of Melbourne, Melbourne, Australia.ORCID 0000-0002-6332-039X

Funding

National Health and Medical Research Council, Australia GNT1196103
6 · The paper itself

Abstract

Plasmids are self-replicating, extrachromosomal genetic elements that serve as vehicles for antimicrobial resistance (AMR) genes. In bacteria, plasmids frequently carry critical AMR genes such as extended spectrum beta-lactamases (

Indexed as

Anti-Bacterial AgentsDrug Resistance, BacterialPlasmidsbeta-LactamasesComputational BiologyDrug Resistance, Multiple, BacterialGene Transfer, HorizontalGenome, BacterialHumansWhole Genome SequencingAnti-Bacterial Agentsbeta-Lactamasesantimicrobial resistancebacteriagenomicsplasmidpublic health

Identifiers

PMID41218129
PMCPMC12691591

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.