Evidence map›Paper›PMID 41217539›Full record

ArticleJournal of molecular modeling2025

New sensors based on DNA base pairs: DFT, QTAIM, and NCI-RDG study.

Mona Boudiaf, Nour Elyakine Amraoui, Henry Chermette

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of molecular modeling, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Mona BoudiafDépartement de Chimie, Faculté Des Sciences de La Matière, Laboratoire de Chimie Des Matériaux Et Des Vivants: Activité & Réactivité, (LCMVAR), Université de Batna 1, Batna, Algeria.
Nour Elyakine AmraouiDépartement de Chimie, Faculté Des Sciences de La Matière, Laboratoire de Chimie Des Matériaux Et Des Vivants: Activité & Réactivité, (LCMVAR), Université de Batna 1, Batna, Algeria. nourelyakine.namraoui@univ-batna.dz.
Henry ChermetteUniversité Claude Bernard Lyon 1 UMR CNRS 5280 Institut Sciences Analytiques, 69622, VILLEURBANNE Cedex, Lyon, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

contextToxic agents in the environment represent a serious threat to human life and pose a major problem, which has led scientists to conduct continuous research into methods for detecting and removing them from the environment. For example, H₂S, SO₂, NH₃, CO, CO₂, NO, and NO₂ are toxic agents commonly found in their gaseous state. Enhancing environmental sensing is, therefore, essential for protecting the ecosystem. In this context, we suggest new complexes of copper and cobalt based on thymine base pair: [thym-Co-thym] and [thym-Cu-thym] as sensors to detect and to attract toxic agents. Our theoretical study demonstrates the potential of the proposed complexes to act as biosensors capable of capturing toxic agents from the environment, as supported by various quantum chemistry methods, including quantum theory of atoms in molecules (QTAIM), reduced density gradient (RDG), natural bond orbitals (NBO), and non-covalent interaction (NCI) analysis. Orbital interaction is favored for H

methodsStudied structures are optimized at DFT/M06-2x/6-311 + G(d,p) level of theory implemented in Gaussian16. The pseudopotential LanL2DZ is used for metals copper and cobalt. [thym-Cu-thym] and [thym-Co-thym] complexes are reoptimized toward considered species and in the presence of humidity (H

Indexed as

DFTDNANCI-RDGQTAIMSensorsToxic agents

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.