Evidence map›Paper›PMID 41214364›Full record

ArticleEMBO reports2025

Sox8 is essential for vertebrate gastrulation.

Sofia Moreira, Artemis G Korovesi, Elias H Barriga

Abstract read
In one paragraph

Article in EMBO reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sofia MoreiraMechanisms of Morphogenesis Lab, Cluster of Excellence Physics of Life (PoL), TU Dresden, Dresden, Germany.ORCID 0000-0002-2085-5001
Artemis G KorovesiPatterning and Morphogenesis Lab, Gulbenkian Institute for Molecular Medicine (GIMM), Lisbon, Portugal.ORCID 0000-0003-1410-6757
Elias H BarrigaMechanisms of Morphogenesis Lab, Cluster of Excellence Physics of Life (PoL), TU Dresden, Dresden, Germany. elias.barriga@tu-dresden.de.ORCID 0000-0003-2912-3613

Funding

Deutsche Forschungsgemeinschaft (DFG) EXC 2068,390729961EC | ERC | HORIZON EUROPE European Research Council (ERC) 950254European Molecular Biology Organization (EMBO) Installation Grant,4765European Molecular Biology Organization (EMBO) Young Investigator,5248Fundação Calouste Gulbenkian (Calouste Gulbenkian Foundation) PhD Fellowship 36/8 l-D/21'la Caixa' Foundation ('la Caixa') Junior Leader,94978MEC | Fundação para a Ciência e a Tecnologia (FCT) CEECIND,2020.00759
6 · The paper itself

Abstract

Gastrulation is a fundamental developmental process during which germ layers are formed and the body axes are defined by the precise orchestration of cell movements and fate specification. Here, we identify the SOXE transcription factor Sox8 as a pivotal regulator of Xenopus laevis gastrulation. We show that Sox8 is expressed in the ventrolateral mesoderm, and that its depletion-via CRISPR-DiCas7-11-leads to blastopore closure defects and impaired AP axis elongation. Transcriptomic analysis reveals that Sox8 modulates Wnt signalling, in part by directly activating transcription of kremen2, a Wnt inhibitor. Indeed, chromatin immunoprecipitation confirms direct binding of Sox8 to the kremen2 promoter. Consequently, Sox8 or Kremen2 knockdown results in an abnormal ventral expansion of wnt11b mRNA that was consistent with increased nuclear β-catenin and reduced BMP signalling. These treatments also led to disruptions in axial and paraxial mesodermal patterning. Together, our data provide new insights into the molecular control of vertebrate gastrulation and invite researchers to assess whether this Sox8/Kremen2 regulatory axis is involved in other biological processes.

Indexed as

GastrulationSOXE Transcription FactorsXenopus laevisXenopus ProteinsAnimalsBody PatterningGene Expression Regulation, DevelopmentalMembrane ProteinsMesodermPromoter Regions, GeneticWnt Signaling PathwayMembrane ProteinsSOXE Transcription FactorsXenopus ProteinsGastrulationKremen2Sox8Ventrolateral MesodermXenopus laevis

Identifiers

PMID41214364
PMCPMC12715262

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.