Evidence map›Paper›PMID 41213800›Full record

ArticleGenes & development2026

Collette A LaVigne, Jaeil Han, He Zhang, Sihoon Cho, Minseon Kim, Komal Sethia, Bret M Evers, Asha Acharya, Tsung-Cheng Chang, Joshua T Mendell

Abstract read
In one paragraph

Article in Genes & development, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
4 · The record

Corrections and comments

  • Update of
    2025
5 · Who and what money

Authors and funding

10 authors.

Collette A LaVigne *Department of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, Texas 75390, USA.
Jaeil Han *Department of Microbiology and Molecular Biology, Chungnam National University, Daejeon 34134, Republic of Korea.
He ZhangDepartment of Health Data Science and Biostatistics, Peter O'Donnell Jr. School of Public Health, University of Texas Southwestern Medical Center, Dallas, Texas 75390, USA.
Sihoon ChoDepartment of Microbiology and Molecular Biology, Chungnam National University, Daejeon 34134, Republic of Korea.
Minseon KimDepartment of Microbiology and Molecular Biology, Chungnam National University, Daejeon 34134, Republic of Korea.
Komal SethiaDepartment of Microbiology, University of Texas Southwestern Medical Center, Dallas, Texas 75390, USA.
Bret M EversDepartment of Pathology, University of Texas Southwestern Medical Center, Dallas, Texas 75390, USA.
Asha AcharyaDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, Texas 75390, USA.
Tsung-Cheng ChangDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, Texas 75390, USA.
Joshua T MendellDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, Texas 75390, USA; joshua.mendell@utsouthwestern.edu.ORCID 0000-0001-8479-2284

Funding

UT Southwestern NORCP30DK127984 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI Jeffrey M Zigman · 2022 to 2026
$7.4M
The role of long noncoding RNA CRNDE in normal physiology and cancerR01CA282036 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI Joshua T Mendell · 2023 to 2026
$1.9M
Regulation of mitochondrial activity and metastasis by dihydrouridine-modified tRNAs in renal cell carcinomaU01CA305105 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI Jan Peter Erzberger, Joshua T Mendell · 2025 to 2026
$1.7M
NCI NIH HHS R01 CA282036NCI NIH HHS U01 CA305105NIDDK NIH HHS P30 DK127984
6 · The paper itself

Abstract

Precise control of microRNA (miRNA) expression is critical during development. An important mechanism of miRNA regulation is target-directed microRNA degradation (TDMD), a pathway in which the binding of miRNAs to specialized trigger RNAs induces ubiquitylation and decay of associated argonaute (AGO) proteins by the ZSWIM8 ubiquitin ligase. Concomitant release of miRNAs results in their rapid turnover. ZSWIM8-deficient mice exhibit reduced body size, cardiopulmonary and neurodevelopmental defects, and perinatal lethality. Despite widespread dysregulation of miRNAs in these animals, the vast majority of presumptive trigger RNAs that induce decay of ZSWIM8-regulated miRNAs remain undefined. Here, using AGO cross-linking and sequencing of hybrids (AGO-CLASH), a high-throughput method for identifying miRNA binding sites, we report the identification of

Indexed as

Body SizeDNA-Binding ProteinsMicroRNAsRNA-Binding ProteinsRNA StabilityTranscription FactorsAnimalsFibroblastsGene Expression Regulation, DevelopmentalMiceRNA, Long NoncodingDNA-Binding ProteinsMalat1 long non-coding RNA, mouseMicroRNAsRNA-Binding ProteinsRNA, Long NoncodingTranscription Factorsembryonic growthLrrc58microRNAmiR-322miR-503Plagl1target-directed microRNA degradationTDMD

Identifiers

PMID41213800
PMCPMC12863257

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.