Evidence map›Paper›PMID 41209769›Full record

ArticleFood chemistry. Molecular sciences2025

Multi-omics analysis reveals the regulatory mechanism of shading on quality-related metabolites in

Xiaojun Niu, Cun Ao, Ruimin Teng, Hongli Li, Yun Zhao, Jizhong Yu, Haitao Huang

Abstract read
In one paragraph

Article in Food chemistry. Molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xiaojun NiuTea Research Institute, Hangzhou Academy of Agricultural Science, Hangzhou 310024, China.
Cun AoTea Research Institute, Hangzhou Academy of Agricultural Science, Hangzhou 310024, China.
Ruimin TengTea Research Institute, Hangzhou Academy of Agricultural Science, Hangzhou 310024, China.
Hongli LiTea Research Institute, Hangzhou Academy of Agricultural Science, Hangzhou 310024, China.
Yun ZhaoTea Research Institute, Hangzhou Academy of Agricultural Science, Hangzhou 310024, China.
Jizhong YuTea Research Institute, Hangzhou Academy of Agricultural Science, Hangzhou 310024, China.
Haitao HuangTea Research Institute, Hangzhou Academy of Agricultural Science, Hangzhou 310024, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Shading enhances green tea quality by promoting the accumulation of amino acids and reducing the synthesis of catechin. We hypothesize that the expression of amino acid-related genes is related to the accumulation of amino acids in tea plants after shading. To explore the regulatory mechanism of shading-induced amino acid biosynthesis, we performed RNA-Seq and qRT-PCR analyses to examine the expression of amino acid metabolism-related genes. Our results revealed significant upregulation of genes associated with theanine biosynthesis and transport. In addition, non-targeted metabolomics and biochemical quantification revealed that the content of theanine and other amino acids significantly increased after shading. Furthermore, shading was found to promote coordinated regulation between light signaling components (e.g., UVR8, HY5, COP1) and transcription factors (such as CsMYB1/4/7/12 and CsPIF3). These findings reveal key molecular mechanisms behind shade-induced amino acid metabolism and provides new insights into our understanding of regulatory mechanisms for shading enhanced tea quality.

Indexed as

Amino acid accumulationCatechin decreaseMetabolomeTeaTranscriptome

Identifiers

PMID41209769
PMCPMC12593660

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.