Evidence map›Paper›PMID 41206050›Full record

ArticleNucleic acids research2025

Structural and functional relevance of the DUF4352 domain in antiviral immunity and physiology of mycobacteria.

Sandhya Sharma, Vikas Jain

Abstract read
In one paragraph

Article in Nucleic acids research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Sandhya SharmaMicrobiology and Molecular Biology Laboratory, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal 462066, India.
Vikas JainMicrobiology and Molecular Biology Laboratory, Department of Biological Sciences, Indian Institute of Science Education and Research Bhopal, Bhopal 462066, India.ORCID 0000-0003-0238-8144

Funding

National Research Foundation SPR/2023/000 423
6 · The paper itself

Abstract

Encounters between bacteria and bacteriophages have led to the evolution of phage and counter-defense arsenals, respectively. Multicopy phage resistance protein, Mpr, in mycobacteria is one such molecule providing resistance against D29 mycobacteriophage, probably by viral DNA degradation. Here, we demonstrate that the DUF4352 domain of Mpr (MprDUF4352) has viral origin, exhibits A/GTP hydrolysis, and synthesizes an unusual guanosine nucleotide, ppGp. The sequence and structure of MprDUF4352 are found to be conserved, and it shows compensatory effects when replaced in Mpr with phage-encoded hypothetical proteins harboring the DUF4352 domain. MprDUF4352 provides a structural framework and facilitates Mpr oligomerization, which is sensitive to GDP concentration. Oligomerized Mpr in the cell membrane cleaves mycobacteriophage genomic DNA, rendering the phage non-viable. As a counter-defense, D29 mutates Gp32 (minor tail protein), and escapes bacterial immunity. In conclusion, we present evidence that the host bacterium has repurposed a phage-encoded DUF4352 to orchestrate a non-abortive host phage defense.

Indexed as

Bacterial ProteinsMycobacteriophagesMycobacteriumMycobacterium smegmatisGuanosine TriphosphateProtein DomainsBacterial ProteinsGuanosine Triphosphate

Identifiers

PMID41206050
PMCPMC12596739

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.