Evidence map›Paper›PMID 41204985›Full record

ArticleCurrent microbiology2025

Screening of Secondary Metabolites with Synergistic Potential Associated with Amoxicillin: An In Vitro and In Silico Approach.

Amanda Vieira de Barros, Gabriela de Lima Menezes, Bruno Oliveira de Veras, Patryck Érmerson Monteiro Dos Santos, Umberto Laino Fulco, Patrícia Maria Guedes Paiva, Márcia Vanusa da Silva, Guilherme Fernandes Teixeira, Ivo Cavalcante Pita Neto, Henrique Douglas Melo Coutinho and 1 more

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Article in Current microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Amanda Vieira de BarrosCentro de Biociências, Departamento de Bioquímica, Universidade Federal de Pernambuco, Recife, Brazil.
Gabriela de Lima MenezesCentro de Biociências, Departamento de Biofísica e Farmacologia, Universidade Federal do Rio Grande do Norte, Natal, Brazil.
Bruno Oliveira de VerasCentro de Biociências, Departamento de Bioquímica, Universidade Federal de Pernambuco, Recife, Brazil.
Patryck Érmerson Monteiro Dos SantosCentro de Biociências, Departamento de Bioquímica, Universidade Federal de Pernambuco, Recife, Brazil.
Umberto Laino FulcoCentro de Biociências, Departamento de Biofísica e Farmacologia, Universidade Federal do Rio Grande do Norte, Natal, Brazil.
Patrícia Maria Guedes PaivaCentro de Biociências, Departamento de Bioquímica, Universidade Federal de Pernambuco, Recife, Brazil.
Márcia Vanusa da SilvaCentro de Biociências, Departamento de Bioquímica, Universidade Federal de Pernambuco, Recife, Brazil.
Guilherme Fernandes TeixeiraLaboratório de Microbiologia e Biologia Molecular - LMBM, Departamento de Química Biológica, Universidade Regional do Cariri, Crato, Ceará, Brazil.
Ivo Cavalcante Pita NetoCECAPE College, Av. Padre Cícero, 3917, São José, Juazeiro do Norte, CE-63024-015, Brazil.
Henrique Douglas Melo CoutinhoLaboratório de Microbiologia e Biologia Molecular - LMBM, Departamento de Química Biológica, Universidade Regional do Cariri, Crato, Ceará, Brazil. hdmcoutinho@gmail.com.
Maria Betânia Melo de OliveiraCentro de Biociências, Departamento de Bioquímica, Universidade Federal de Pernambuco, Recife, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The advancement of Antimicrobial Resistance (AMR) and the lack of effective treatments demand the development of new drugs to combat resistant bacteria. Plants, in turn, produce various Secondary Metabolites (SMs) with diverse molecular structures, which are promising therapeutic alternatives. This study aims to evaluate the potential of 13 plant derived SMs in modulating bacterial resistance to amoxicillin (AMO), and to investigate the mechanisms of action against Staphylococcus aureus (ATCC 29213) and Klebsiella pneumoniae (UFPDA 396) using Molecular Docking (MD) simulations. Among the tested SMs, p-Cymene (CYM) showed the best activity against S. aureus, with a Minimum Inhibitory Concentration (MIC) of 512 µg/mL, while Eugenol (EUG) was most effective against K. pneumoniae, with an MIC of 1024 µg/mL. In resistance modulation assays using the checkerboard method, SMs including EUG, CYM, α-pinene (APN), β-pinene (BPN), Geraniol (GER), Linalool (LNL), and Myrcene (MYR) exhibited synergistic effects when combined with AMO, with Fractional Inhibitory Concentration Index (FICI) values ranging from 0.1 to 0.5. Additionally, both the SMs and AMO, as well as their synergistic combinations, were docked to molecular targets associated with resistance and virulence in S. aureus and K. pneumoniae. The drug-protein complexes showed favorable interaction energies, confirming that the binding free energy of the synergistic combinations was superior to that of the individual compounds. Overall, the most significant differences in activity between combined and isolated treatments were observed for MurD in S. aureus and SidA in K. pneumoniae. These findings suggest that SMs may serve as potential candidates for the development of synergistic or additive molecules to be used alongside conventional antibiotics, representing a promising strategy to mitigate AMR and offer viable and effective therapeutic alternatives.

Indexed as

AmoxicillinAnti-Bacterial AgentsSecondary MetabolismComputer SimulationDrug Resistance, BacterialDrug SynergismKlebsiella pneumoniaeMicrobial Sensitivity TestsMolecular Docking SimulationStaphylococcus aureusAmoxicillinAnti-Bacterial Agents

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.