Evidence map›Paper›PMID 41204405›Full record

ArticleBMC genomics2025

Ovarian microrna transcriptome of Macrobrachium rosenbergii after eyestalk ablation: unveiling molecular switches in reproductive regulation.

Huwei Yuan, Haihua Cheng, Fei Peng, Yang Xu, Xilian Li, Yunpeng Fan, Qiang Gao

Abstract read
In one paragraph

Article in BMC genomics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Functional Characterization ofInternational journal of molecular sciences · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Huwei YuanAgriculture Ministry Key Laboratory of Healthy Freshwater Aquaculture, Key Laboratory of Fish Health and Nutrition of Zhejiang Province, Zhejiang Institute of Freshwater Fisheries, Huzhou, Zhejiang , 313001, China.
Haihua ChengAgriculture Ministry Key Laboratory of Healthy Freshwater Aquaculture, Key Laboratory of Fish Health and Nutrition of Zhejiang Province, Zhejiang Institute of Freshwater Fisheries, Huzhou, Zhejiang , 313001, China.
Fei PengAgriculture Ministry Key Laboratory of Healthy Freshwater Aquaculture, Key Laboratory of Fish Health and Nutrition of Zhejiang Province, Zhejiang Institute of Freshwater Fisheries, Huzhou, Zhejiang , 313001, China.
Yang XuAgriculture Ministry Key Laboratory of Healthy Freshwater Aquaculture, Key Laboratory of Fish Health and Nutrition of Zhejiang Province, Zhejiang Institute of Freshwater Fisheries, Huzhou, Zhejiang , 313001, China.
Xilian LiAgriculture Ministry Key Laboratory of Healthy Freshwater Aquaculture, Key Laboratory of Fish Health and Nutrition of Zhejiang Province, Zhejiang Institute of Freshwater Fisheries, Huzhou, Zhejiang , 313001, China.
Yunpeng FanAgriculture Ministry Key Laboratory of Healthy Freshwater Aquaculture, Key Laboratory of Fish Health and Nutrition of Zhejiang Province, Zhejiang Institute of Freshwater Fisheries, Huzhou, Zhejiang , 313001, China.
Qiang GaoAgriculture Ministry Key Laboratory of Healthy Freshwater Aquaculture, Key Laboratory of Fish Health and Nutrition of Zhejiang Province, Zhejiang Institute of Freshwater Fisheries, Huzhou, Zhejiang , 313001, China. gaoqiang@zjfish.com.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMacrobrachium rosenbergii is an economically important freshwater prawn species in China. The X-organ–sinus gland complex in crustacean eyestalks regulates reproduction through neurohormones, with ablation significantly promoting ovarian maturation. However, the miRNA mediated molecular mechanisms underlying this eyestalk ovary regulatory axis remain poorly characterized in M. rosenbergii.

resultsRNA sequencing of 9 ovarian samples produced 207 million paired-end reads (62.25 Gb total), averaging > 6 Gb per sample with Q30 scores exceeding 94.42%. The reads showed 84.32% alignment efficiency to the reference transcriptome. Transcriptomic analysis identified 769 differentially expressed genes (DEGs) and 176 differentially expressed miRNAs (DEMs), which were significantly enriched in reproduction related pathways including steroid biosynthesis and Wnt signaling.​ Integration analysis revealed 11 functionally important miRNA-mRNA regulatory pairs targeting key ovarian development genes. qRT-PCR validation confirmed the high reliability of sequencing data.

conclusionsTranscriptomic analysis of ovarian mRNA and miRNA in eyestalk-ablated M. rosenbergii revealed the molecular mechanisms of eyestalk mediated ovarian regulation.​​ Eyestalk ablation significantly upregulated vitellogenin genes and ecdysteroid biosynthesis genes, ​​demonstrating its dual regulatory role in reproduction and molting.​​ The findings indicate potential roles of the eyestalk in reproductive regulation via specific pathways, with the identified DEGs and DEMs serving as a valuable resource for future investigations.

Indexed as

MicroRNAsOvaryPalaemonidaeTranscriptomeAnimalsFemaleGene Expression ProfilingReproductionMicroRNAsEyestalk ablation​Macrobrachium rosenbergii​MicroRNAOvary

Identifiers

PMID41204405
PMCPMC12595823

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.