Evidence map›Paper›PMID 41203997›Full record

ArticleExperimental & molecular medicine2025

Single-cell transcriptomics of the myeloid milieu reveals an angiogenic niche in triple-negative breast cancer.

Yechan Choi, Minkyu Shim, Suhn Hyung Kim, Duk Ki Kim, Juhee Jeong, Jinyoung Byeon, Giyong Jang, Ji-Yeon Kim, Paul Robson, Charles Lee and 2 more

Abstract read
In one paragraph

Article in Experimental & molecular medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Review
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  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. The pro-fibrogenic role of SPP1Frontiers in immunology · 2026
    Review
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Yechan Choi *Department of Anatomy and Cell Biology, Department of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Republic of Korea.
Minkyu Shim *Department of Anatomy and Cell Biology, Department of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Republic of Korea.ORCID http://orcid.org/0009-0004-9182-2479
Suhn Hyung KimDepartment of Anatomy and Cell Biology, Department of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Republic of Korea.
Duk Ki KimDepartment of Anatomy and Cell Biology, Department of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Republic of Korea.
Juhee JeongDepartment of Anatomy and Cell Biology, Department of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Republic of Korea.
Jinyoung ByeonDepartment of Surgery, Seoul National University College of Medicine, Seoul, Republic of Korea.
Giyong JangGenomic Medicine Institute, Medical Research Center, Seoul National University, Seoul, Republic of Korea.
Ji-Yeon KimDivision of Hematology-Oncology, Department of Medicine, Samsung Medical Center, Sungkyunkwan University School of Medicine, Seoul, Republic of Korea.ORCID http://orcid.org/0000-0002-4223-1929
Paul RobsonThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA.ORCID http://orcid.org/0000-0002-0191-3958
Charles LeeThe Jackson Laboratory for Genomic Medicine, Farmington, CT, USA. charles.lee@jax.org.ORCID http://orcid.org/0000-0001-7317-6662
Han-Byoel LeeDepartment of Surgery, Seoul National University College of Medicine, Seoul, Republic of Korea. hblee.md@snu.ac.kr.
Keehoon JungDepartment of Anatomy and Cell Biology, Department of Biomedical Sciences, Seoul National University College of Medicine, Seoul, Republic of Korea. keehoon.jung@snu.ac.kr.ORCID http://orcid.org/0000-0002-2199-5292

Funding

National Research Foundation of Korea (NRF) RS-2023-00208004National Research Foundation of Korea (NRF) RS-2023-00217571
6 · The paper itself

Abstract

Intratumoral myeloid cells are highly heterogeneous in terms of development and function and are pivotal for forming and regulating the tumor microenvironment. However, the myeloid milieu in triple-negative breast cancer (TNBC) remains poorly understood. Here, to elucidate this myeloid milieu, we integrated in-house and public single-cell RNA sequencing data. We detected diverse neutrophil and mononuclear-phagocyte subtypes and delineated their developmental trajectories and functions. Of particular interest were the VEGFA

Indexed as

Myeloid CellsNeovascularization, PathologicSingle-Cell AnalysisTranscriptomeTriple Negative Breast NeoplasmsTumor MicroenvironmentAnimalsFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMacrophagesMiceNeutrophilsVascular Endothelial Growth Factor AVascular Endothelial Growth Factor A

Identifiers

PMID41203997
PMCPMC12686459

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.